Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx2P43241 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx2P43241 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx2P43241 Gm4294-201ENSMUST00000105169 614 ntBASIC11.08□□□□□ -0.64
Cdx2P43241 Gm9673-201ENSMUST00000119287 781 ntBASIC11.08□□□□□ -0.64
Cdx2P43241 Gm12948-201ENSMUST00000119406 682 ntBASIC11.08□□□□□ -0.64
Cdx2P43241 Gm16219-201ENSMUST00000120096 274 ntBASIC11.08□□□□□ -0.64
Cdx2P43241 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cdx2P43241 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cdx2P43241 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx2P43241 Gm17192-201ENSMUST00000169031 511 ntBASIC11.08□□□□□ -0.64
Cdx2P43241 Gm8451-201ENSMUST00000170338 447 ntBASIC11.08□□□□□ -0.64
Cdx2P43241 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx2P43241 Gm26982-201ENSMUST00000182250 1151 ntBASIC11.08□□□□□ -0.64
Cdx2P43241 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx2P43241 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.08□□□□□ -0.64
Cdx2P43241 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.08□□□□□ -0.64
Cdx2P43241 Gm18776-201ENSMUST00000188833 654 ntBASIC11.08□□□□□ -0.64
Cdx2P43241 Gm8197-202ENSMUST00000193422 934 ntBASIC11.08□□□□□ -0.64
Cdx2P43241 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx2P43241 Gm43671-201ENSMUST00000200422 433 ntBASIC11.08□□□□□ -0.64
Cdx2P43241 Gm42655-201ENSMUST00000202782 1134 ntBASIC11.08□□□□□ -0.64
Cdx2P43241 Gm44124-201ENSMUST00000204159 472 ntBASIC11.08□□□□□ -0.64
Cdx2P43241 Gm6423-201ENSMUST00000204315 934 ntBASIC11.08□□□□□ -0.64
Cdx2P43241 Gm43912-201ENSMUST00000204352 538 ntBASIC11.08□□□□□ -0.64
Cdx2P43241 Gm3433-201ENSMUST00000210149 1058 ntBASIC11.08□□□□□ -0.64
Cdx2P43241 Gm19640-201ENSMUST00000214849 464 ntBASIC11.08□□□□□ -0.64
Cdx2P43241 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.08□□□□□ -0.64
Cdx2P43241 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx2P43241 CT573086.4-201ENSMUST00000226729 342 ntBASIC11.08□□□□□ -0.64
Cdx2P43241 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx2P43241 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx2P43241 Gm7536-201ENSMUST00000077389 444 ntBASIC11.08□□□□□ -0.64
Cdx2P43241 Gm5453-201ENSMUST00000080866 447 ntBASIC11.08□□□□□ -0.64
Cdx2P43241 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cdx2P43241 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx2P43241 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx2P43241 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx2P43241 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cdx2P43241 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx2P43241 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx2P43241 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx2P43241 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx2P43241 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx2P43241 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx2P43241 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx2P43241 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx2P43241 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx2P43241 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Cdx2P43241 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.08□□□□□ -0.64
Cdx2P43241 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx2P43241 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.08□□□□□ -0.64
Cdx2P43241 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cdx2P43241 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.08□□□□□ -0.64
Cdx2P43241 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx2P43241 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.07□□□□□ -0.64
Cdx2P43241 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx2P43241 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx2P43241 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx2P43241 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx2P43241 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx2P43241 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx2P43241 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx2P43241 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx2P43241 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx2P43241 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx2P43241 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx2P43241 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx2P43241 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.07□□□□□ -0.64
Cdx2P43241 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cdx2P43241 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Cdx2P43241 Gm12179-201ENSMUST00000118344 1272 ntBASIC11.07□□□□□ -0.64
Cdx2P43241 Gm15003-201ENSMUST00000118884 446 ntBASIC11.07□□□□□ -0.64
Cdx2P43241 Gm11354-201ENSMUST00000121974 422 ntBASIC11.07□□□□□ -0.64
Cdx2P43241 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.07□□□□□ -0.64
Cdx2P43241 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC11.07□□□□□ -0.64
Cdx2P43241 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.07□□□□□ -0.64
Cdx2P43241 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Cdx2P43241 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC11.07□□□□□ -0.64
Cdx2P43241 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Cdx2P43241 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx2P43241 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx2P43241 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Cdx2P43241 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx2P43241 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx2P43241 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx2P43241 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx2P43241 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx2P43241 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx2P43241 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx2P43241 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx2P43241 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cdx2P43241 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx2P43241 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cdx2P43241 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Cdx2P43241 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.07□□□□□ -0.64
Cdx2P43241 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx2P43241 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC11.07□□□□□ -0.64
Cdx2P43241 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cdx2P43241 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms