Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd1P40201 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd1P40201 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd1P40201 Gm29245-201ENSMUST00000187332 1416 ntBASIC17.11■□□□□ 0.33
Chd1P40201 Nprl3-202ENSMUST00000109389 1642 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Chd1P40201 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd1P40201 Fcrl1-206ENSMUST00000194786 1540 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chd1P40201 Gm13135-201ENSMUST00000117628 3121 ntBASIC17.1■□□□□ 0.33
Chd1P40201 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC17.1■□□□□ 0.33
Chd1P40201 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1P40201 4933428M09Rik-201ENSMUST00000113046 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1P40201 Gm12463-201ENSMUST00000118271 849 ntBASIC17.1■□□□□ 0.33
Chd1P40201 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1P40201 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC17.1■□□□□ 0.33
Chd1P40201 Gm8464-202ENSMUST00000146697 1142 ntBASIC17.1■□□□□ 0.33
Chd1P40201 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC17.1■□□□□ 0.33
Chd1P40201 Gm4750-201ENSMUST00000151942 1142 ntBASIC17.1■□□□□ 0.33
Chd1P40201 Gm24346-201ENSMUST00000158712 194 ntBASIC17.1■□□□□ 0.33
Chd1P40201 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1P40201 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1P40201 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Chd1P40201 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Chd1P40201 Sdcbp-204ENSMUST00000108374 1803 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1P40201 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Chd1P40201 Gm38111-201ENSMUST00000194817 2741 ntBASIC17.1■□□□□ 0.33
Chd1P40201 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1P40201 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1P40201 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1P40201 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1P40201 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1P40201 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1P40201 AC158777.1-201ENSMUST00000226216 1724 ntBASIC17.1■□□□□ 0.33
Chd1P40201 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC17.1■□□□□ 0.33
Chd1P40201 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1P40201 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1P40201 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1P40201 Ifna5-201ENSMUST00000102804 570 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Chd1P40201 Gm14231-201ENSMUST00000120090 592 ntBASIC17.1■□□□□ 0.33
Chd1P40201 Pvalb-202ENSMUST00000120592 953 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1P40201 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC17.1■□□□□ 0.33
Chd1P40201 Prss23os-203ENSMUST00000208814 975 ntTSL 5 BASIC17.1■□□□□ 0.33
Chd1P40201 Prss23os-204ENSMUST00000209064 972 ntTSL 5 BASIC17.1■□□□□ 0.33
Chd1P40201 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1P40201 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC17.1■□□□□ 0.33
Chd1P40201 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chd1P40201 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Chd1P40201 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chd1P40201 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd1P40201 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC17.09■□□□□ 0.33
Chd1P40201 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd1P40201 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC17.09■□□□□ 0.33
Chd1P40201 Gm45428-201ENSMUST00000209619 1789 ntBASIC17.09■□□□□ 0.33
Chd1P40201 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd1P40201 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chd1P40201 Slc31a2-202ENSMUST00000107467 868 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd1P40201 H2afy3-201ENSMUST00000151919 1112 ntBASIC17.09■□□□□ 0.33
Chd1P40201 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chd1P40201 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Chd1P40201 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC17.09■□□□□ 0.33
Chd1P40201 Platr10-202ENSMUST00000191479 818 ntBASIC17.09■□□□□ 0.33
Chd1P40201 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC17.09■□□□□ 0.33
Chd1P40201 Gm42859-201ENSMUST00000199572 193 ntBASIC17.09■□□□□ 0.33
Chd1P40201 Gm45124-201ENSMUST00000206723 2755 ntBASIC17.09■□□□□ 0.33
Chd1P40201 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC17.09■□□□□ 0.33
Chd1P40201 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC17.09■□□□□ 0.33
Chd1P40201 AC163646.3-202ENSMUST00000228685 691 ntBASIC17.09■□□□□ 0.33
Chd1P40201 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chd1P40201 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd1P40201 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Chd1P40201 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC17.09■□□□□ 0.33
Chd1P40201 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chd1P40201 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chd1P40201 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chd1P40201 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chd1P40201 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chd1P40201 Gm13688-201ENSMUST00000121557 608 ntBASIC17.08■□□□□ 0.32
Chd1P40201 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chd1P40201 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chd1P40201 Gm3945-201ENSMUST00000196637 683 ntBASIC17.08■□□□□ 0.32
Chd1P40201 Gm9523-201ENSMUST00000199146 1159 ntBASIC17.08■□□□□ 0.32
Chd1P40201 Gm45308-201ENSMUST00000210610 415 ntBASIC17.08■□□□□ 0.32
Chd1P40201 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC17.08■□□□□ 0.32
Chd1P40201 Gm8162-201ENSMUST00000213951 665 ntBASIC17.08■□□□□ 0.32
Chd1P40201 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC17.08■□□□□ 0.32
Chd1P40201 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chd1P40201 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chd1P40201 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC17.08■□□□□ 0.32
Chd1P40201 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chd1P40201 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chd1P40201 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC17.08■□□□□ 0.32
Chd1P40201 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC17.08■□□□□ 0.32
Chd1P40201 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chd1P40201 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chd1P40201 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
Chd1P40201 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chd1P40201 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chd1P40201 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chd1P40201 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC17.08■□□□□ 0.32
Chd1P40201 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd1P40201 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms