Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Gm3318-201ENSMUST00000217604 1183 ntBASIC10.79□□□□□ -0.68
Sftpa1P35242 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC10.79□□□□□ -0.68
Sftpa1P35242 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC10.79□□□□□ -0.68
Sftpa1P35242 CT573047.1-201ENSMUST00000223652 851 ntBASIC10.79□□□□□ -0.68
Sftpa1P35242 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.79□□□□□ -0.68
Sftpa1P35242 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sftpa1P35242 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
Sftpa1P35242 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sftpa1P35242 Gm7536-201ENSMUST00000077389 444 ntBASIC10.79□□□□□ -0.68
Sftpa1P35242 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sftpa1P35242 Gm5453-201ENSMUST00000080866 447 ntBASIC10.79□□□□□ -0.68
Sftpa1P35242 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sftpa1P35242 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.79□□□□□ -0.68
Sftpa1P35242 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.79□□□□□ -0.68
Sftpa1P35242 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sftpa1P35242 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sftpa1P35242 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sftpa1P35242 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sftpa1P35242 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sftpa1P35242 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Sftpa1P35242 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sftpa1P35242 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sftpa1P35242 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sftpa1P35242 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Sftpa1P35242 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sftpa1P35242 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Sftpa1P35242 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Sftpa1P35242 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Sftpa1P35242 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Sftpa1P35242 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.79□□□□□ -0.68
Sftpa1P35242 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sftpa1P35242 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sftpa1P35242 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Sftpa1P35242 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sftpa1P35242 Gm18798-201ENSMUST00000187264 1700 ntBASIC10.78□□□□□ -0.68
Sftpa1P35242 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sftpa1P35242 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Sftpa1P35242 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sftpa1P35242 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Sftpa1P35242 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.78□□□□□ -0.68
Sftpa1P35242 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sftpa1P35242 Gm6322-201ENSMUST00000118789 1004 ntBASIC10.78□□□□□ -0.68
Sftpa1P35242 Gm12791-201ENSMUST00000120788 655 ntBASIC10.78□□□□□ -0.68
Sftpa1P35242 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sftpa1P35242 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sftpa1P35242 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Sftpa1P35242 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sftpa1P35242 Gm17070-201ENSMUST00000170463 784 ntBASIC10.78□□□□□ -0.68
Sftpa1P35242 Gm9630-201ENSMUST00000178304 885 ntBASIC10.78□□□□□ -0.68
Sftpa1P35242 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Sftpa1P35242 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC10.78□□□□□ -0.68
Sftpa1P35242 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC10.78□□□□□ -0.68
Sftpa1P35242 Gm28833-201ENSMUST00000189671 559 ntBASIC10.78□□□□□ -0.68
Sftpa1P35242 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC10.78□□□□□ -0.68
Sftpa1P35242 Gm42433-201ENSMUST00000196806 940 ntBASIC10.78□□□□□ -0.68
Sftpa1P35242 Gm42655-201ENSMUST00000202782 1134 ntBASIC10.78□□□□□ -0.68
Sftpa1P35242 Gm29763-201ENSMUST00000205306 616 ntBASIC10.78□□□□□ -0.68
Sftpa1P35242 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.78□□□□□ -0.68
Sftpa1P35242 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC10.78□□□□□ -0.68
Sftpa1P35242 AC153962.2-201ENSMUST00000219417 550 ntBASIC10.78□□□□□ -0.68
Sftpa1P35242 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC10.78□□□□□ -0.68
Sftpa1P35242 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
Sftpa1P35242 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sftpa1P35242 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sftpa1P35242 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Sftpa1P35242 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sftpa1P35242 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.78□□□□□ -0.68
Sftpa1P35242 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sftpa1P35242 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.78□□□□□ -0.68
Sftpa1P35242 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC10.78□□□□□ -0.68
Sftpa1P35242 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Sftpa1P35242 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Sftpa1P35242 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sftpa1P35242 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Sftpa1P35242 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.78□□□□□ -0.68
Sftpa1P35242 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Sftpa1P35242 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.77□□□□□ -0.68
Sftpa1P35242 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sftpa1P35242 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Sftpa1P35242 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.68
Sftpa1P35242 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sftpa1P35242 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Sftpa1P35242 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sftpa1P35242 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sftpa1P35242 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sftpa1P35242 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC10.77□□□□□ -0.69
Sftpa1P35242 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sftpa1P35242 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sftpa1P35242 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Sftpa1P35242 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC10.77□□□□□ -0.69
Sftpa1P35242 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sftpa1P35242 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Sftpa1P35242 Gm25053-201ENSMUST00000103982 133 ntBASIC10.77□□□□□ -0.69
Sftpa1P35242 Gm25922-201ENSMUST00000104281 130 ntBASIC10.77□□□□□ -0.69
Sftpa1P35242 Gm13422-201ENSMUST00000118834 504 ntBASIC10.77□□□□□ -0.69
Sftpa1P35242 Gm12274-201ENSMUST00000120062 385 ntBASIC10.77□□□□□ -0.69
Sftpa1P35242 Gm12712-201ENSMUST00000120676 801 ntBASIC10.77□□□□□ -0.69
Sftpa1P35242 Gm25554-201ENSMUST00000158075 113 ntBASIC10.77□□□□□ -0.69
Sftpa1P35242 Gm24679-201ENSMUST00000158762 111 ntBASIC10.77□□□□□ -0.69
Sftpa1P35242 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC10.77□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms