Protein–RNA interactions for Protein: P27659

Rpl3, 60S ribosomal protein L3, mousemouse

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl3P27659 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.05□□□□□ -0.64
Rpl3P27659 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl3P27659 Gm43630-201ENSMUST00000201550 776 ntBASIC11.05□□□□□ -0.64
Rpl3P27659 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl3P27659 Gm5186-201ENSMUST00000218781 920 ntBASIC11.05□□□□□ -0.64
Rpl3P27659 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl3P27659 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl3P27659 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl3P27659 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl3P27659 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl3P27659 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl3P27659 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Rpl3P27659 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl3P27659 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Rpl3P27659 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl3P27659 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl3P27659 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl3P27659 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl3P27659 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl3P27659 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl3P27659 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl3P27659 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl3P27659 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.05□□□□□ -0.64
Rpl3P27659 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Rpl3P27659 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl3P27659 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Rpl3P27659 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl3P27659 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl3P27659 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl3P27659 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.04□□□□□ -0.64
Rpl3P27659 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Rpl3P27659 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.04□□□□□ -0.64
Rpl3P27659 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl3P27659 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl3P27659 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Rpl3P27659 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl3P27659 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl3P27659 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl3P27659 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl3P27659 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl3P27659 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl3P27659 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.04□□□□□ -0.64
Rpl3P27659 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl3P27659 Gm14723-201ENSMUST00000118686 215 ntBASIC11.04□□□□□ -0.64
Rpl3P27659 Gm15207-201ENSMUST00000119259 442 ntBASIC11.04□□□□□ -0.64
Rpl3P27659 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.04□□□□□ -0.64
Rpl3P27659 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.04□□□□□ -0.64
Rpl3P27659 Gm5982-201ENSMUST00000196234 512 ntBASIC11.04□□□□□ -0.64
Rpl3P27659 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl3P27659 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.04□□□□□ -0.64
Rpl3P27659 Gm44967-201ENSMUST00000207047 631 ntBASIC11.04□□□□□ -0.64
Rpl3P27659 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl3P27659 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.04□□□□□ -0.64
Rpl3P27659 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.04□□□□□ -0.64
Rpl3P27659 Gm9797-202ENSMUST00000218003 294 ntBASIC11.04□□□□□ -0.64
Rpl3P27659 Gm7940-201ENSMUST00000218195 769 ntBASIC11.04□□□□□ -0.64
Rpl3P27659 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.04□□□□□ -0.64
Rpl3P27659 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.04□□□□□ -0.64
Rpl3P27659 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.04□□□□□ -0.64
Rpl3P27659 Gm26448-201ENSMUST00000082446 203 ntBASIC11.04□□□□□ -0.64
Rpl3P27659 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl3P27659 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl3P27659 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl3P27659 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Rpl3P27659 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Rpl3P27659 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl3P27659 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.04□□□□□ -0.64
Rpl3P27659 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl3P27659 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl3P27659 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.04□□□□□ -0.64
Rpl3P27659 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Rpl3P27659 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
Rpl3P27659 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.04□□□□□ -0.64
Rpl3P27659 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.04□□□□□ -0.64
Rpl3P27659 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl3P27659 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Rpl3P27659 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl3P27659 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Rpl3P27659 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Rpl3P27659 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl3P27659 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.03□□□□□ -0.64
Rpl3P27659 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl3P27659 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Rpl3P27659 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl3P27659 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl3P27659 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl3P27659 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl3P27659 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl3P27659 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl3P27659 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.03□□□□□ -0.64
Rpl3P27659 Gm25890-201ENSMUST00000177643 165 ntBASIC11.03□□□□□ -0.64
Rpl3P27659 Gm4310-201ENSMUST00000177847 889 ntBASIC11.03□□□□□ -0.64
Rpl3P27659 Rnu1b2-201ENSMUST00000178073 165 ntBASIC11.03□□□□□ -0.64
Rpl3P27659 Rnu1b1-201ENSMUST00000178250 165 ntBASIC11.03□□□□□ -0.64
Rpl3P27659 Gm22614-201ENSMUST00000178300 165 ntBASIC11.03□□□□□ -0.64
Rpl3P27659 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Rpl3P27659 Gm28071-201ENSMUST00000190355 478 ntBASIC11.03□□□□□ -0.64
Rpl3P27659 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.03□□□□□ -0.64
Rpl3P27659 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.03□□□□□ -0.64
Rpl3P27659 Gm7783-201ENSMUST00000204795 781 ntBASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms