Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Tnfrsf1bP25119 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.83□□□□□ -0.67
Tnfrsf1bP25119 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Gm37965-201ENSMUST00000195304 1362 ntBASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Mir680-2-201ENSMUST00000102163 110 ntBASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Gm23251-201ENSMUST00000103773 110 ntBASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Gm13916-201ENSMUST00000117368 628 ntBASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Gm11783-201ENSMUST00000119549 885 ntBASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Mir5132-201ENSMUST00000175166 71 ntBASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Gm16701-202ENSMUST00000180995 934 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Gm18351-201ENSMUST00000188646 883 ntBASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Gm43068-201ENSMUST00000201095 1273 ntBASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Gm45113-201ENSMUST00000207518 165 ntBASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 CT009713.8-201ENSMUST00000225448 560 ntBASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Gm43760-201ENSMUST00000202120 3015 ntBASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Gm29644-201ENSMUST00000189003 1341 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Tnfrsf1bP25119 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Gm18263-201ENSMUST00000220846 1928 ntBASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Gm43727-201ENSMUST00000198021 2647 ntBASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Gm43174-201ENSMUST00000195914 2445 ntBASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Gm13809-201ENSMUST00000117921 597 ntBASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Gm6506-201ENSMUST00000119775 1136 ntBASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Gm23958-201ENSMUST00000157207 105 ntBASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Gm26047-201ENSMUST00000157308 113 ntBASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Rn7s1-201ENSMUST00000174924 300 ntBASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Rn7s2-201ENSMUST00000175032 300 ntBASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Gm26461-201ENSMUST00000175064 290 ntBASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Gm26047-202ENSMUST00000198840 115 ntBASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Gm45909-201ENSMUST00000212413 1031 ntBASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Abhd11os-203ENSMUST00000222613 363 ntBASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 AC134860.1-201ENSMUST00000224867 660 ntBASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Tnfrsf1bP25119 Gm9785-201ENSMUST00000062642 1006 ntBASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms