Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC12.1□□□□□ -0.47
Hoxd8P23463 Gm11422-201ENSMUST00000118925 1103 ntBASIC12.1□□□□□ -0.47
Hoxd8P23463 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Hoxd8P23463 Gm12030-201ENSMUST00000121917 223 ntBASIC12.1□□□□□ -0.47
Hoxd8P23463 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxd8P23463 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.1□□□□□ -0.47
Hoxd8P23463 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxd8P23463 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC12.1□□□□□ -0.47
Hoxd8P23463 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC12.1□□□□□ -0.47
Hoxd8P23463 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Hoxd8P23463 Gm29067-201ENSMUST00000190821 470 ntBASIC12.1□□□□□ -0.47
Hoxd8P23463 Gm37284-201ENSMUST00000193607 539 ntBASIC12.1□□□□□ -0.47
Hoxd8P23463 Gm9884-201ENSMUST00000194343 1222 ntBASIC12.1□□□□□ -0.47
Hoxd8P23463 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC12.1□□□□□ -0.47
Hoxd8P23463 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.1□□□□□ -0.47
Hoxd8P23463 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxd8P23463 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxd8P23463 Gm45592-201ENSMUST00000209605 1043 ntBASIC12.1□□□□□ -0.47
Hoxd8P23463 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxd8P23463 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.1□□□□□ -0.47
Hoxd8P23463 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxd8P23463 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxd8P23463 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxd8P23463 Gm5805-201ENSMUST00000072779 456 ntBASIC12.1□□□□□ -0.47
Hoxd8P23463 Gm5513-201ENSMUST00000072982 1218 ntBASIC12.1□□□□□ -0.47
Hoxd8P23463 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.1□□□□□ -0.47
Hoxd8P23463 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxd8P23463 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxd8P23463 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxd8P23463 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxd8P23463 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxd8P23463 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxd8P23463 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxd8P23463 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxd8P23463 Gm19680-201ENSMUST00000095050 1513 ntBASIC12.1□□□□□ -0.47
Hoxd8P23463 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxd8P23463 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxd8P23463 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxd8P23463 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxd8P23463 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxd8P23463 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxd8P23463 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxd8P23463 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
Hoxd8P23463 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxd8P23463 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxd8P23463 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxd8P23463 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxd8P23463 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC12.09□□□□□ -0.47
Hoxd8P23463 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxd8P23463 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxd8P23463 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.09□□□□□ -0.47
Hoxd8P23463 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxd8P23463 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxd8P23463 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxd8P23463 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxd8P23463 Gm25148-201ENSMUST00000104611 123 ntBASIC12.09□□□□□ -0.47
Hoxd8P23463 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC12.09□□□□□ -0.47
Hoxd8P23463 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxd8P23463 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC12.09□□□□□ -0.47
Hoxd8P23463 Gm5133-201ENSMUST00000118940 1255 ntBASIC12.09□□□□□ -0.47
Hoxd8P23463 Gm12990-201ENSMUST00000120372 468 ntBASIC12.09□□□□□ -0.47
Hoxd8P23463 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxd8P23463 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxd8P23463 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.09□□□□□ -0.47
Hoxd8P23463 Gm23694-201ENSMUST00000179335 110 ntBASIC12.09□□□□□ -0.47
Hoxd8P23463 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC12.09□□□□□ -0.47
Hoxd8P23463 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxd8P23463 Gm5342-201ENSMUST00000181982 1003 ntBASIC12.09□□□□□ -0.47
Hoxd8P23463 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxd8P23463 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxd8P23463 Gm43380-201ENSMUST00000200421 220 ntBASIC12.09□□□□□ -0.47
Hoxd8P23463 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.09□□□□□ -0.47
Hoxd8P23463 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.09□□□□□ -0.47
Hoxd8P23463 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.09□□□□□ -0.47
Hoxd8P23463 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.09□□□□□ -0.47
Hoxd8P23463 Gm18377-201ENSMUST00000215141 607 ntBASIC12.09□□□□□ -0.47
Hoxd8P23463 AC122891.1-201ENSMUST00000218671 268 ntBASIC12.09□□□□□ -0.47
Hoxd8P23463 AC153152.3-201ENSMUST00000222188 1135 ntBASIC12.09□□□□□ -0.47
Hoxd8P23463 AC129308.3-201ENSMUST00000225652 524 ntBASIC12.09□□□□□ -0.47
Hoxd8P23463 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxd8P23463 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxd8P23463 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxd8P23463 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC12.09□□□□□ -0.47
Hoxd8P23463 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxd8P23463 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Hoxd8P23463 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxd8P23463 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Hoxd8P23463 Gm8899-201ENSMUST00000214635 1332 ntBASIC12.09□□□□□ -0.47
Hoxd8P23463 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Hoxd8P23463 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Hoxd8P23463 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.08□□□□□ -0.47
Hoxd8P23463 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.08□□□□□ -0.47
Hoxd8P23463 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Hoxd8P23463 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Hoxd8P23463 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Hoxd8P23463 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Hoxd8P23463 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Hoxd8P23463 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxd8P23463 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Hoxd8P23463 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms