Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC12.81□□□□□ -0.36
Pde6bP23440 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.81□□□□□ -0.36
Pde6bP23440 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.81□□□□□ -0.36
Pde6bP23440 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Pde6bP23440 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6bP23440 AC129219.2-201ENSMUST00000224324 701 ntBASIC12.81□□□□□ -0.36
Pde6bP23440 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6bP23440 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6bP23440 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.81□□□□□ -0.36
Pde6bP23440 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6bP23440 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6bP23440 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.81□□□□□ -0.36
Pde6bP23440 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6bP23440 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6bP23440 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6bP23440 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.81□□□□□ -0.36
Pde6bP23440 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6bP23440 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6bP23440 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6bP23440 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.81□□□□□ -0.36
Pde6bP23440 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6bP23440 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6bP23440 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pde6bP23440 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.81□□□□□ -0.36
Pde6bP23440 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.8□□□□□ -0.36
Pde6bP23440 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6bP23440 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Pde6bP23440 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Pde6bP23440 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Pde6bP23440 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6bP23440 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6bP23440 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6bP23440 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6bP23440 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.8□□□□□ -0.36
Pde6bP23440 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Pde6bP23440 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6bP23440 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.8□□□□□ -0.36
Pde6bP23440 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6bP23440 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Pde6bP23440 Gm12795-201ENSMUST00000117594 539 ntBASIC12.8□□□□□ -0.36
Pde6bP23440 Gm11451-201ENSMUST00000118946 630 ntBASIC12.8□□□□□ -0.36
Pde6bP23440 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6bP23440 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6bP23440 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.8□□□□□ -0.36
Pde6bP23440 Gm37299-201ENSMUST00000193951 826 ntBASIC12.8□□□□□ -0.36
Pde6bP23440 Gm38117-201ENSMUST00000194653 939 ntBASIC12.8□□□□□ -0.36
Pde6bP23440 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.8□□□□□ -0.36
Pde6bP23440 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC12.8□□□□□ -0.36
Pde6bP23440 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.8□□□□□ -0.36
Pde6bP23440 Gm6867-201ENSMUST00000219165 425 ntBASIC12.8□□□□□ -0.36
Pde6bP23440 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.8□□□□□ -0.36
Pde6bP23440 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.8□□□□□ -0.36
Pde6bP23440 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6bP23440 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6bP23440 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6bP23440 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6bP23440 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6bP23440 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.8□□□□□ -0.36
Pde6bP23440 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Pde6bP23440 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6bP23440 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6bP23440 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.8□□□□□ -0.36
Pde6bP23440 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6bP23440 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6bP23440 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6bP23440 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6bP23440 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6bP23440 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6bP23440 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Pde6bP23440 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.8□□□□□ -0.36
Pde6bP23440 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
Pde6bP23440 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6bP23440 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pde6bP23440 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Pde6bP23440 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6bP23440 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6bP23440 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6bP23440 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6bP23440 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6bP23440 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6bP23440 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6bP23440 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6bP23440 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6bP23440 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6bP23440 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6bP23440 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6bP23440 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pde6bP23440 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.79□□□□□ -0.36
Pde6bP23440 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pde6bP23440 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6bP23440 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6bP23440 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6bP23440 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6bP23440 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.79□□□□□ -0.36
Pde6bP23440 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6bP23440 Gm4654-201ENSMUST00000183305 982 ntBASIC12.79□□□□□ -0.36
Pde6bP23440 Gm28324-201ENSMUST00000187913 264 ntBASIC12.79□□□□□ -0.36
Pde6bP23440 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pde6bP23440 Gm34023-201ENSMUST00000195539 217 ntBASIC12.79□□□□□ -0.36
Pde6bP23440 Gm44980-201ENSMUST00000205826 314 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms