Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Srp54P14576 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Srp54P14576 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Srp54P14576 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Srp54P14576 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Srp54P14576 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.53□□□□□ -0.56
Srp54P14576 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Srp54P14576 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Srp54P14576 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.53□□□□□ -0.56
Srp54P14576 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Srp54P14576 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Srp54P14576 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Srp54P14576 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Srp54P14576 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Srp54P14576 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.52□□□□□ -0.56
Srp54P14576 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Srp54P14576 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Srp54P14576 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Srp54P14576 Gm44999-201ENSMUST00000207456 1493 ntBASIC11.52□□□□□ -0.56
Srp54P14576 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54P14576 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Srp54P14576 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54P14576 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
Srp54P14576 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.52□□□□□ -0.57
Srp54P14576 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54P14576 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Srp54P14576 Gm14193-201ENSMUST00000105067 153 ntBASIC11.52□□□□□ -0.57
Srp54P14576 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54P14576 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54P14576 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Srp54P14576 Gm8731-201ENSMUST00000118088 412 ntBASIC11.52□□□□□ -0.57
Srp54P14576 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC11.52□□□□□ -0.57
Srp54P14576 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54P14576 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54P14576 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.52□□□□□ -0.57
Srp54P14576 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Srp54P14576 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54P14576 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Srp54P14576 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.52□□□□□ -0.57
Srp54P14576 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC11.52□□□□□ -0.57
Srp54P14576 Gm6450-201ENSMUST00000200896 574 ntBASIC11.52□□□□□ -0.57
Srp54P14576 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC11.52□□□□□ -0.57
Srp54P14576 Gm45398-201ENSMUST00000210561 165 ntBASIC11.52□□□□□ -0.57
Srp54P14576 AC122876.1-201ENSMUST00000217619 825 ntBASIC11.52□□□□□ -0.57
Srp54P14576 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54P14576 Gm9826-201ENSMUST00000029124 1299 ntBASIC11.52□□□□□ -0.57
Srp54P14576 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54P14576 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Srp54P14576 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Srp54P14576 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54P14576 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.52□□□□□ -0.57
Srp54P14576 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54P14576 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54P14576 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC11.52□□□□□ -0.57
Srp54P14576 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54P14576 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54P14576 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54P14576 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Srp54P14576 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54P14576 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54P14576 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54P14576 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54P14576 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54P14576 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Srp54P14576 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
Srp54P14576 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54P14576 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Srp54P14576 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54P14576 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54P14576 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Srp54P14576 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.51□□□□□ -0.57
Srp54P14576 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54P14576 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54P14576 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54P14576 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54P14576 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Srp54P14576 Gm15352-201ENSMUST00000118696 270 ntBASIC11.51□□□□□ -0.57
Srp54P14576 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.51□□□□□ -0.57
Srp54P14576 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.51□□□□□ -0.57
Srp54P14576 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54P14576 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Srp54P14576 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54P14576 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Srp54P14576 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54P14576 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54P14576 Gm9540-201ENSMUST00000188230 478 ntBASIC11.51□□□□□ -0.57
Srp54P14576 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54P14576 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54P14576 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54P14576 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.51□□□□□ -0.57
Srp54P14576 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.51□□□□□ -0.57
Srp54P14576 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Srp54P14576 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54P14576 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54P14576 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54P14576 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54P14576 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Srp54P14576 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Srp54P14576 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Srp54P14576 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms