Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl3P10855 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl3P10855 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl3P10855 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl3P10855 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl3P10855 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.29□□□□□ -0.76
Ccl3P10855 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl3P10855 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl3P10855 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl3P10855 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Ccl3P10855 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl3P10855 Gm38094-201ENSMUST00000195864 2978 ntBASIC10.29□□□□□ -0.76
Ccl3P10855 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl3P10855 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl3P10855 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl3P10855 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl3P10855 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl3P10855 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl3P10855 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.28□□□□□ -0.76
Ccl3P10855 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl3P10855 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl3P10855 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl3P10855 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC10.28□□□□□ -0.76
Ccl3P10855 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Ccl3P10855 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.28□□□□□ -0.76
Ccl3P10855 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC10.28□□□□□ -0.76
Ccl3P10855 Gm17192-201ENSMUST00000169031 511 ntBASIC10.28□□□□□ -0.76
Ccl3P10855 Gm26982-201ENSMUST00000182250 1151 ntBASIC10.28□□□□□ -0.76
Ccl3P10855 Gm18776-201ENSMUST00000188833 654 ntBASIC10.28□□□□□ -0.76
Ccl3P10855 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC10.28□□□□□ -0.76
Ccl3P10855 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC10.28□□□□□ -0.76
Ccl3P10855 Gm6423-201ENSMUST00000204315 934 ntBASIC10.28□□□□□ -0.76
Ccl3P10855 Gm44647-201ENSMUST00000207402 428 ntBASIC10.28□□□□□ -0.76
Ccl3P10855 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
Ccl3P10855 Gm18204-201ENSMUST00000209835 793 ntBASIC10.28□□□□□ -0.76
Ccl3P10855 Gm3433-201ENSMUST00000210149 1058 ntBASIC10.28□□□□□ -0.76
Ccl3P10855 Gm45484-201ENSMUST00000210310 1141 ntBASIC10.28□□□□□ -0.76
Ccl3P10855 Gm45500-201ENSMUST00000211676 803 ntBASIC10.28□□□□□ -0.76
Ccl3P10855 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl3P10855 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl3P10855 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Ccl3P10855 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl3P10855 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl3P10855 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl3P10855 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl3P10855 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Ccl3P10855 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl3P10855 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl3P10855 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl3P10855 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl3P10855 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl3P10855 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl3P10855 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl3P10855 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl3P10855 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.28□□□□□ -0.76
Ccl3P10855 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl3P10855 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl3P10855 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl3P10855 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl3P10855 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl3P10855 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl3P10855 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Ccl3P10855 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.28□□□□□ -0.76
Ccl3P10855 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Ccl3P10855 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ccl3P10855 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ccl3P10855 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ccl3P10855 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC10.27□□□□□ -0.76
Ccl3P10855 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Ccl3P10855 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.76
Ccl3P10855 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ccl3P10855 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Ccl3P10855 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Ccl3P10855 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Ccl3P10855 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ccl3P10855 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Ccl3P10855 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ccl3P10855 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ccl3P10855 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ccl3P10855 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.76
Ccl3P10855 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.27□□□□□ -0.76
Ccl3P10855 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl3P10855 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl3P10855 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl3P10855 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl3P10855 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl3P10855 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl3P10855 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl3P10855 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.27□□□□□ -0.77
Ccl3P10855 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl3P10855 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.27□□□□□ -0.77
Ccl3P10855 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Ccl3P10855 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl3P10855 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Ccl3P10855 Gm12179-201ENSMUST00000118344 1272 ntBASIC10.27□□□□□ -0.77
Ccl3P10855 Gm6322-201ENSMUST00000118789 1004 ntBASIC10.27□□□□□ -0.77
Ccl3P10855 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Ccl3P10855 Gm18201-201ENSMUST00000174735 875 ntBASIC10.27□□□□□ -0.77
Ccl3P10855 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Ccl3P10855 Gm43912-201ENSMUST00000204352 538 ntBASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms