Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Gm23596-201ENSMUST00000104304 132 ntBASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Gm7857-201ENSMUST00000117957 358 ntBASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Gm12036-201ENSMUST00000120008 530 ntBASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Gm17040-202ENSMUST00000170597 889 ntBASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Gm27552-201ENSMUST00000183351 62 ntBASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Gm27844-201ENSMUST00000183613 62 ntBASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.72□□□□□ -0.37
Chmp6P0C0A3 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Gm270-201ENSMUST00000223010 976 ntBASIC12.72□□□□□ -0.37
Chmp6P0C0A3 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Gm5705-201ENSMUST00000066241 711 ntBASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp6P0C0A3 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp6P0C0A3 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp6P0C0A3 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.71□□□□□ -0.37
Chmp6P0C0A3 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.71□□□□□ -0.37
Chmp6P0C0A3 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp6P0C0A3 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp6P0C0A3 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp6P0C0A3 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp6P0C0A3 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp6P0C0A3 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp6P0C0A3 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp6P0C0A3 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Chmp6P0C0A3 Gm11509-201ENSMUST00000117358 325 ntBASIC12.71□□□□□ -0.37
Chmp6P0C0A3 Gm11660-201ENSMUST00000120955 412 ntBASIC12.71□□□□□ -0.37
Chmp6P0C0A3 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.71□□□□□ -0.37
Chmp6P0C0A3 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp6P0C0A3 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp6P0C0A3 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp6P0C0A3 Gm19287-201ENSMUST00000203190 358 ntBASIC12.71□□□□□ -0.37
Chmp6P0C0A3 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.71□□□□□ -0.37
Chmp6P0C0A3 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp6P0C0A3 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp6P0C0A3 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp6P0C0A3 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.71□□□□□ -0.37
Chmp6P0C0A3 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp6P0C0A3 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chmp6P0C0A3 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Chmp6P0C0A3 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Chmp6P0C0A3 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chmp6P0C0A3 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chmp6P0C0A3 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC12.71□□□□□ -0.38
Chmp6P0C0A3 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chmp6P0C0A3 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chmp6P0C0A3 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Chmp6P0C0A3 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chmp6P0C0A3 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chmp6P0C0A3 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chmp6P0C0A3 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chmp6P0C0A3 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp6P0C0A3 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Gm25881-201ENSMUST00000157783 103 ntBASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Gm3332-201ENSMUST00000189337 928 ntBASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.7□□□□□ -0.38
Chmp6P0C0A3 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Gm44136-201ENSMUST00000203819 1106 ntBASIC12.7□□□□□ -0.38
Chmp6P0C0A3 Gm9797-202ENSMUST00000218003 294 ntBASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms