Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Hoxb3P09026 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.86□□□□□ -0.51
Hoxb3P09026 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.86□□□□□ -0.51
Hoxb3P09026 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC11.86□□□□□ -0.51
Hoxb3P09026 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Hoxb3P09026 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Hoxb3P09026 Gm14833-201ENSMUST00000118345 1027 ntBASIC11.86□□□□□ -0.51
Hoxb3P09026 Gm13204-201ENSMUST00000120110 821 ntBASIC11.86□□□□□ -0.51
Hoxb3P09026 Gm11502-201ENSMUST00000120917 1211 ntBASIC11.86□□□□□ -0.51
Hoxb3P09026 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC11.86□□□□□ -0.51
Hoxb3P09026 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 Gm15744-201ENSMUST00000161734 213 ntBASIC11.86□□□□□ -0.51
Hoxb3P09026 Gm7289-201ENSMUST00000168993 734 ntBASIC11.86□□□□□ -0.51
Hoxb3P09026 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 Gm7719-201ENSMUST00000182374 975 ntBASIC11.86□□□□□ -0.51
Hoxb3P09026 Gm18348-201ENSMUST00000191227 820 ntBASIC11.86□□□□□ -0.51
Hoxb3P09026 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC11.86□□□□□ -0.51
Hoxb3P09026 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Hoxb3P09026 AC126043.1-201ENSMUST00000221304 1141 ntBASIC11.86□□□□□ -0.51
Hoxb3P09026 AC242269.1-201ENSMUST00000227020 741 ntBASIC11.86□□□□□ -0.51
Hoxb3P09026 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Hoxb3P09026 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Hoxb3P09026 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.86□□□□□ -0.51
Hoxb3P09026 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Hoxb3P09026 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC11.86□□□□□ -0.51
Hoxb3P09026 AC160863.4-201ENSMUST00000218099 1334 ntTSL 5 BASIC11.86□□□□□ -0.51
Hoxb3P09026 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hoxb3P09026 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxb3P09026 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Hoxb3P09026 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxb3P09026 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Hoxb3P09026 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Hoxb3P09026 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxb3P09026 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.85□□□□□ -0.51
Hoxb3P09026 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxb3P09026 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxb3P09026 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.85□□□□□ -0.51
Hoxb3P09026 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Hoxb3P09026 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxb3P09026 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Hoxb3P09026 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxb3P09026 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxb3P09026 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Hoxb3P09026 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Hoxb3P09026 Gm26831-201ENSMUST00000181458 1380 ntBASIC11.85□□□□□ -0.51
Hoxb3P09026 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.85□□□□□ -0.51
Hoxb3P09026 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.85□□□□□ -0.51
Hoxb3P09026 Mir466f-2-201ENSMUST00000104805 94 ntBASIC11.85□□□□□ -0.51
Hoxb3P09026 Csn1s2b-203ENSMUST00000113279 745 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxb3P09026 Gm5419-201ENSMUST00000119301 527 ntBASIC11.85□□□□□ -0.51
Hoxb3P09026 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.85□□□□□ -0.51
Hoxb3P09026 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxb3P09026 Gm22144-201ENSMUST00000157402 102 ntBASIC11.85□□□□□ -0.51
Hoxb3P09026 Gm15716-201ENSMUST00000162457 404 ntTSL 3 BASIC11.85□□□□□ -0.51
Hoxb3P09026 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC11.85□□□□□ -0.51
Hoxb3P09026 Gm8100-201ENSMUST00000182906 988 ntBASIC11.85□□□□□ -0.51
Hoxb3P09026 Gm28686-201ENSMUST00000187404 609 ntBASIC11.85□□□□□ -0.51
Hoxb3P09026 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxb3P09026 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC11.85□□□□□ -0.51
Hoxb3P09026 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.85□□□□□ -0.51
Hoxb3P09026 Gm37851-201ENSMUST00000193871 889 ntBASIC11.85□□□□□ -0.51
Hoxb3P09026 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxb3P09026 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxb3P09026 Gm19269-201ENSMUST00000211401 804 ntBASIC11.85□□□□□ -0.51
Hoxb3P09026 Gm9797-202ENSMUST00000218003 294 ntBASIC11.85□□□□□ -0.51
Hoxb3P09026 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Hoxb3P09026 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxb3P09026 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxb3P09026 AC163038.1-201ENSMUST00000223632 1142 ntBASIC11.85□□□□□ -0.51
Hoxb3P09026 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.85□□□□□ -0.51
Hoxb3P09026 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Hoxb3P09026 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms