Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
ApoeP08226 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ApoeP08226 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
ApoeP08226 Erich3-203ENSMUST00000189969 3460 ntBASIC11.03□□□□□ -0.64
ApoeP08226 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC11.03□□□□□ -0.64
ApoeP08226 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
ApoeP08226 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
ApoeP08226 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
ApoeP08226 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
ApoeP08226 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
ApoeP08226 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
ApoeP08226 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
ApoeP08226 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
ApoeP08226 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ApoeP08226 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
ApoeP08226 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
ApoeP08226 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ApoeP08226 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ApoeP08226 Gripap1-203ENSMUST00000115675 3015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
ApoeP08226 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
ApoeP08226 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
ApoeP08226 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
ApoeP08226 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ApoeP08226 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.03□□□□□ -0.64
ApoeP08226 Auts2-212ENSMUST00000178555 309 ntBASIC11.03□□□□□ -0.64
ApoeP08226 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.03□□□□□ -0.64
ApoeP08226 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.03□□□□□ -0.64
ApoeP08226 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
ApoeP08226 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
ApoeP08226 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.03□□□□□ -0.64
ApoeP08226 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ApoeP08226 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
ApoeP08226 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.03□□□□□ -0.64
ApoeP08226 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ApoeP08226 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
ApoeP08226 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
ApoeP08226 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
ApoeP08226 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
ApoeP08226 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ApoeP08226 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ApoeP08226 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
ApoeP08226 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
ApoeP08226 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ApoeP08226 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ApoeP08226 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
ApoeP08226 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ApoeP08226 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
ApoeP08226 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
ApoeP08226 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
ApoeP08226 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
ApoeP08226 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.02□□□□□ -0.64
ApoeP08226 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
ApoeP08226 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
ApoeP08226 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
ApoeP08226 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
ApoeP08226 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
ApoeP08226 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.02□□□□□ -0.65
ApoeP08226 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ApoeP08226 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
ApoeP08226 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ApoeP08226 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
ApoeP08226 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ApoeP08226 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.02□□□□□ -0.65
ApoeP08226 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ApoeP08226 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
ApoeP08226 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.02□□□□□ -0.65
ApoeP08226 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.02□□□□□ -0.65
ApoeP08226 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.02□□□□□ -0.65
ApoeP08226 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ApoeP08226 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.02□□□□□ -0.65
ApoeP08226 Gm19287-201ENSMUST00000203190 358 ntBASIC11.02□□□□□ -0.65
ApoeP08226 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.02□□□□□ -0.65
ApoeP08226 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
ApoeP08226 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ApoeP08226 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.02□□□□□ -0.65
ApoeP08226 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ApoeP08226 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ApoeP08226 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ApoeP08226 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ApoeP08226 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
ApoeP08226 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
ApoeP08226 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
ApoeP08226 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
ApoeP08226 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ApoeP08226 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
ApoeP08226 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ApoeP08226 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
ApoeP08226 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ApoeP08226 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
ApoeP08226 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ApoeP08226 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ApoeP08226 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ApoeP08226 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
ApoeP08226 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
ApoeP08226 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
ApoeP08226 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ApoeP08226 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ApoeP08226 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
ApoeP08226 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
ApoeP08226 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms