Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 Sema4g-203ENSMUST00000179305 4290 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC10.24□□□□□ -0.77
P04224 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 Nwd1-201ENSMUST00000093427 7840 ntTSL 5 BASIC10.24□□□□□ -0.77
P04224 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 Mlh3-202ENSMUST00000166821 5420 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
P04224 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.24□□□□□ -0.77
P04224 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
P04224 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.24□□□□□ -0.77
P04224 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.24□□□□□ -0.77
P04224 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
P04224 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.24□□□□□ -0.77
P04224 Gm8018-201ENSMUST00000173536 789 ntBASIC10.24□□□□□ -0.77
P04224 Gm29649-201ENSMUST00000185649 419 ntBASIC10.24□□□□□ -0.77
P04224 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC10.24□□□□□ -0.77
P04224 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
P04224 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 AC153974.2-201ENSMUST00000218577 1025 ntBASIC10.24□□□□□ -0.77
P04224 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
P04224 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
P04224 Gm6091-201ENSMUST00000098307 165 ntBASIC10.24□□□□□ -0.77
P04224 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
P04224 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.24□□□□□ -0.77
P04224 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.24□□□□□ -0.77
P04224 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
P04224 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC10.24□□□□□ -0.77
P04224 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.24□□□□□ -0.77
P04224 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
P04224 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P04224 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
P04224 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC10.23□□□□□ -0.77
P04224 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
P04224 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
P04224 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
P04224 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
P04224 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
P04224 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
P04224 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P04224 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P04224 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P04224 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
P04224 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
P04224 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
P04224 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P04224 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P04224 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P04224 Myo18a-201ENSMUST00000000645 7307 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
P04224 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
P04224 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
P04224 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
P04224 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
P04224 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC10.23□□□□□ -0.77
P04224 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P04224 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.23□□□□□ -0.77
P04224 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC10.23□□□□□ -0.77
P04224 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
P04224 AC159376.1-201ENSMUST00000218504 630 ntBASIC10.23□□□□□ -0.77
P04224 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
P04224 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
P04224 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
P04224 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
P04224 Gm28693-201ENSMUST00000189622 2638 ntBASIC10.23□□□□□ -0.77
P04224 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.23□□□□□ -0.77
P04224 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC10.23□□□□□ -0.77
P04224 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
P04224 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.23□□□□□ -0.77
P04224 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
P04224 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms