Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxa3P02831 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Hoxa3P02831 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxa3P02831 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxa3P02831 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxa3P02831 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxa3P02831 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Hoxa3P02831 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC9.82□□□□□ -0.84
Hoxa3P02831 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxa3P02831 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxa3P02831 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxa3P02831 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxa3P02831 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxa3P02831 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxa3P02831 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxa3P02831 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxa3P02831 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxa3P02831 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxa3P02831 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC9.82□□□□□ -0.84
Hoxa3P02831 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxa3P02831 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxa3P02831 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxa3P02831 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxa3P02831 Gm24891-201ENSMUST00000104391 136 ntBASIC9.82□□□□□ -0.84
Hoxa3P02831 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Hoxa3P02831 Gm12616-201ENSMUST00000118594 382 ntBASIC9.82□□□□□ -0.84
Hoxa3P02831 Gm15595-201ENSMUST00000120840 961 ntBASIC9.82□□□□□ -0.84
Hoxa3P02831 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxa3P02831 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxa3P02831 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC9.82□□□□□ -0.84
Hoxa3P02831 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxa3P02831 Gm12624-201ENSMUST00000177615 382 ntBASIC9.82□□□□□ -0.84
Hoxa3P02831 Gm12621-201ENSMUST00000177760 382 ntBASIC9.82□□□□□ -0.84
Hoxa3P02831 Gm12615-201ENSMUST00000177970 382 ntBASIC9.82□□□□□ -0.84
Hoxa3P02831 Gm12622-201ENSMUST00000177975 382 ntBASIC9.82□□□□□ -0.84
Hoxa3P02831 Gm12627-201ENSMUST00000178412 382 ntBASIC9.82□□□□□ -0.84
Hoxa3P02831 Gm12625-201ENSMUST00000179122 382 ntBASIC9.82□□□□□ -0.84
Hoxa3P02831 Gm12614-201ENSMUST00000179586 382 ntBASIC9.82□□□□□ -0.84
Hoxa3P02831 Gm12613-201ENSMUST00000180323 382 ntBASIC9.82□□□□□ -0.84
Hoxa3P02831 Gm37835-201ENSMUST00000193305 361 ntBASIC9.82□□□□□ -0.84
Hoxa3P02831 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC9.82□□□□□ -0.84
Hoxa3P02831 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC9.82□□□□□ -0.84
Hoxa3P02831 Gm17931-201ENSMUST00000208132 634 ntBASIC9.82□□□□□ -0.84
Hoxa3P02831 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC9.82□□□□□ -0.84
Hoxa3P02831 AC154849.4-201ENSMUST00000224868 365 ntBASIC9.82□□□□□ -0.84
Hoxa3P02831 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxa3P02831 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxa3P02831 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Hoxa3P02831 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC9.82□□□□□ -0.84
Hoxa3P02831 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxa3P02831 Gm37348-201ENSMUST00000193104 1789 ntBASIC9.82□□□□□ -0.84
Hoxa3P02831 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxa3P02831 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxa3P02831 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxa3P02831 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxa3P02831 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxa3P02831 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxa3P02831 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxa3P02831 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxa3P02831 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxa3P02831 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxa3P02831 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC9.82□□□□□ -0.84
Hoxa3P02831 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxa3P02831 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Hoxa3P02831 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxa3P02831 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxa3P02831 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC9.81□□□□□ -0.84
Hoxa3P02831 Gm38273-201ENSMUST00000194987 2382 ntBASIC9.81□□□□□ -0.84
Hoxa3P02831 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Hoxa3P02831 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC9.81□□□□□ -0.84
Hoxa3P02831 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxa3P02831 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxa3P02831 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxa3P02831 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC9.81□□□□□ -0.84
Hoxa3P02831 Cog3-203ENSMUST00000227473 4197 ntBASIC9.81□□□□□ -0.84
Hoxa3P02831 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxa3P02831 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxa3P02831 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxa3P02831 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Hoxa3P02831 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxa3P02831 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxa3P02831 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxa3P02831 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxa3P02831 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxa3P02831 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
Hoxa3P02831 Gm13809-201ENSMUST00000117921 597 ntBASIC9.81□□□□□ -0.84
Hoxa3P02831 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC9.81□□□□□ -0.84
Hoxa3P02831 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxa3P02831 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxa3P02831 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxa3P02831 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxa3P02831 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Hoxa3P02831 Gm4310-201ENSMUST00000177847 889 ntBASIC9.81□□□□□ -0.84
Hoxa3P02831 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC9.81□□□□□ -0.84
Hoxa3P02831 Gm7467-201ENSMUST00000185173 652 ntBASIC9.81□□□□□ -0.84
Hoxa3P02831 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxa3P02831 Ighv1-48-201ENSMUST00000191795 294 ntBASIC9.81□□□□□ -0.84
Hoxa3P02831 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC9.81□□□□□ -0.84
Hoxa3P02831 Mir7686-201ENSMUST00000200604 57 ntBASIC9.81□□□□□ -0.84
Hoxa3P02831 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms