Protein–RNA interactions for Protein: P01867

Igh-3, Ig gamma-2B chain C region, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-3P01867 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Igh-3P01867 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Igh-3P01867 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Igh-3P01867 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Igh-3P01867 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.22□□□□□ -0.77
Igh-3P01867 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Igh-3P01867 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Igh-3P01867 Gm43289-201ENSMUST00000200537 1475 ntBASIC10.22□□□□□ -0.77
Igh-3P01867 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Igh-3P01867 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Igh-3P01867 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Igh-3P01867 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Igh-3P01867 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Igh-3P01867 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-3P01867 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-3P01867 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-3P01867 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-3P01867 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-3P01867 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-3P01867 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC10.21□□□□□ -0.77
Igh-3P01867 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.21□□□□□ -0.77
Igh-3P01867 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-3P01867 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-3P01867 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-3P01867 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-3P01867 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-3P01867 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-3P01867 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-3P01867 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-3P01867 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-3P01867 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.21□□□□□ -0.77
Igh-3P01867 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-3P01867 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-3P01867 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Igh-3P01867 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.21□□□□□ -0.77
Igh-3P01867 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-3P01867 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-3P01867 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-3P01867 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-3P01867 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC10.21□□□□□ -0.77
Igh-3P01867 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC10.21□□□□□ -0.77
Igh-3P01867 Gm5732-201ENSMUST00000182596 1007 ntBASIC10.21□□□□□ -0.77
Igh-3P01867 Gm9540-201ENSMUST00000188230 478 ntBASIC10.21□□□□□ -0.77
Igh-3P01867 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-3P01867 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-3P01867 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-3P01867 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-3P01867 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.21□□□□□ -0.77
Igh-3P01867 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-3P01867 Ntng1-201ENSMUST00000051253 327 ntBASIC10.21□□□□□ -0.77
Igh-3P01867 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Igh-3P01867 Ginm1-202ENSMUST00000065124 300 ntBASIC10.21□□□□□ -0.77
Igh-3P01867 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Igh-3P01867 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Igh-3P01867 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.21□□□□□ -0.78
Igh-3P01867 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Igh-3P01867 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.21□□□□□ -0.78
Igh-3P01867 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Igh-3P01867 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Igh-3P01867 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Igh-3P01867 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Igh-3P01867 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Igh-3P01867 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.21□□□□□ -0.78
Igh-3P01867 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC10.21□□□□□ -0.78
Igh-3P01867 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Igh-3P01867 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Igh-3P01867 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Igh-3P01867 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Igh-3P01867 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Igh-3P01867 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.21□□□□□ -0.78
Igh-3P01867 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Igh-3P01867 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Igh-3P01867 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Igh-3P01867 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Igh-3P01867 Gm10548-201ENSMUST00000097631 2629 ntBASIC10.2□□□□□ -0.78
Igh-3P01867 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC10.2□□□□□ -0.78
Igh-3P01867 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Igh-3P01867 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igh-3P01867 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Igh-3P01867 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igh-3P01867 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igh-3P01867 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igh-3P01867 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Igh-3P01867 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igh-3P01867 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Igh-3P01867 Gm22711-201ENSMUST00000116890 133 ntBASIC10.2□□□□□ -0.78
Igh-3P01867 Gm13916-201ENSMUST00000117368 628 ntBASIC10.2□□□□□ -0.78
Igh-3P01867 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Igh-3P01867 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.2□□□□□ -0.78
Igh-3P01867 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Igh-3P01867 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.2□□□□□ -0.78
Igh-3P01867 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Igh-3P01867 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.2□□□□□ -0.78
Igh-3P01867 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Igh-3P01867 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Igh-3P01867 Gm18367-201ENSMUST00000176139 600 ntBASIC10.2□□□□□ -0.78
Igh-3P01867 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Igh-3P01867 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Igh-3P01867 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Igh-3P01867 Gm43068-201ENSMUST00000201095 1273 ntBASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms