Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vti1aO89116 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC12.63□□□□□ -0.39
Vti1aO89116 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC12.63□□□□□ -0.39
Vti1aO89116 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.63□□□□□ -0.39
Vti1aO89116 Prrxl1-205ENSMUST00000228878 723 ntBASIC12.63□□□□□ -0.39
Vti1aO89116 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vti1aO89116 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Vti1aO89116 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vti1aO89116 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Vti1aO89116 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.63□□□□□ -0.39
Vti1aO89116 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vti1aO89116 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vti1aO89116 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.63□□□□□ -0.39
Vti1aO89116 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vti1aO89116 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vti1aO89116 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vti1aO89116 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.63□□□□□ -0.39
Vti1aO89116 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vti1aO89116 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.63□□□□□ -0.39
Vti1aO89116 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vti1aO89116 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vti1aO89116 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vti1aO89116 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vti1aO89116 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vti1aO89116 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vti1aO89116 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vti1aO89116 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vti1aO89116 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.62□□□□□ -0.39
Vti1aO89116 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.62□□□□□ -0.39
Vti1aO89116 Gm13615-201ENSMUST00000120242 1612 ntBASIC12.62□□□□□ -0.39
Vti1aO89116 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vti1aO89116 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vti1aO89116 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.62□□□□□ -0.39
Vti1aO89116 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vti1aO89116 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vti1aO89116 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vti1aO89116 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vti1aO89116 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.62□□□□□ -0.39
Vti1aO89116 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vti1aO89116 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vti1aO89116 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vti1aO89116 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vti1aO89116 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Vti1aO89116 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vti1aO89116 Gm15207-201ENSMUST00000119259 442 ntBASIC12.62□□□□□ -0.39
Vti1aO89116 Gm23771-201ENSMUST00000178702 110 ntBASIC12.62□□□□□ -0.39
Vti1aO89116 Gm34023-201ENSMUST00000195539 217 ntBASIC12.62□□□□□ -0.39
Vti1aO89116 Gm9645-201ENSMUST00000197131 792 ntBASIC12.62□□□□□ -0.39
Vti1aO89116 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vti1aO89116 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.62□□□□□ -0.39
Vti1aO89116 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vti1aO89116 Gm2553-201ENSMUST00000215986 605 ntBASIC12.62□□□□□ -0.39
Vti1aO89116 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC12.62□□□□□ -0.39
Vti1aO89116 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vti1aO89116 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Vti1aO89116 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vti1aO89116 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vti1aO89116 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vti1aO89116 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.62□□□□□ -0.39
Vti1aO89116 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vti1aO89116 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vti1aO89116 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.62□□□□□ -0.39
Vti1aO89116 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vti1aO89116 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.62□□□□□ -0.39
Vti1aO89116 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Vti1aO89116 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Vti1aO89116 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Vti1aO89116 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vti1aO89116 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vti1aO89116 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vti1aO89116 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vti1aO89116 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vti1aO89116 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.62□□□□□ -0.39
Vti1aO89116 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vti1aO89116 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vti1aO89116 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vti1aO89116 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vti1aO89116 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vti1aO89116 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Vti1aO89116 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vti1aO89116 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vti1aO89116 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vti1aO89116 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vti1aO89116 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.61□□□□□ -0.39
Vti1aO89116 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Vti1aO89116 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vti1aO89116 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.61□□□□□ -0.39
Vti1aO89116 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vti1aO89116 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vti1aO89116 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.61□□□□□ -0.39
Vti1aO89116 Gm11892-201ENSMUST00000117711 1202 ntBASIC12.61□□□□□ -0.39
Vti1aO89116 Gm15610-201ENSMUST00000120584 195 ntBASIC12.61□□□□□ -0.39
Vti1aO89116 Gm12516-201ENSMUST00000120819 385 ntBASIC12.61□□□□□ -0.39
Vti1aO89116 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.61□□□□□ -0.39
Vti1aO89116 Gm8815-201ENSMUST00000173809 620 ntBASIC12.61□□□□□ -0.39
Vti1aO89116 Gm25072-201ENSMUST00000175233 235 ntBASIC12.61□□□□□ -0.39
Vti1aO89116 Gm18893-201ENSMUST00000198416 943 ntBASIC12.61□□□□□ -0.39
Vti1aO89116 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC12.61□□□□□ -0.39
Vti1aO89116 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.61□□□□□ -0.39
Vti1aO89116 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 126.8 ms