Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CopeO89079 Gm12015-201ENSMUST00000117065 843 ntBASIC12□□□□□ -0.49
CopeO89079 Gm11511-201ENSMUST00000118146 540 ntBASIC12□□□□□ -0.49
CopeO89079 Gm13326-201ENSMUST00000118730 1011 ntBASIC12□□□□□ -0.49
CopeO89079 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC12□□□□□ -0.49
CopeO89079 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12□□□□□ -0.49
CopeO89079 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12□□□□□ -0.49
CopeO89079 Gm37489-201ENSMUST00000191883 159 ntBASIC12□□□□□ -0.49
CopeO89079 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CopeO89079 Gm4607-201ENSMUST00000206649 577 ntBASIC12□□□□□ -0.49
CopeO89079 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
CopeO89079 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12□□□□□ -0.49
CopeO89079 Gm8712-201ENSMUST00000221090 701 ntBASIC12□□□□□ -0.49
CopeO89079 Gm7046-201ENSMUST00000221351 977 ntBASIC12□□□□□ -0.49
CopeO89079 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12□□□□□ -0.49
CopeO89079 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12□□□□□ -0.49
CopeO89079 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CopeO89079 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CopeO89079 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CopeO89079 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
CopeO89079 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
CopeO89079 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12□□□□□ -0.49
CopeO89079 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12□□□□□ -0.49
CopeO89079 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CopeO89079 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC12□□□□□ -0.49
CopeO89079 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CopeO89079 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
CopeO89079 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CopeO89079 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12□□□□□ -0.49
CopeO89079 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CopeO89079 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
CopeO89079 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CopeO89079 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12□□□□□ -0.49
CopeO89079 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CopeO89079 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CopeO89079 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CopeO89079 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
CopeO89079 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
CopeO89079 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CopeO89079 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
CopeO89079 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CopeO89079 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.99□□□□□ -0.49
CopeO89079 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CopeO89079 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
CopeO89079 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.99□□□□□ -0.49
CopeO89079 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CopeO89079 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC11.99□□□□□ -0.49
CopeO89079 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
CopeO89079 Gm38002-201ENSMUST00000193255 180 ntBASIC11.99□□□□□ -0.49
CopeO89079 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CopeO89079 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CopeO89079 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
CopeO89079 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
CopeO89079 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CopeO89079 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.99□□□□□ -0.49
CopeO89079 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
CopeO89079 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.99□□□□□ -0.49
CopeO89079 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CopeO89079 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.99□□□□□ -0.49
CopeO89079 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.99□□□□□ -0.49
CopeO89079 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
CopeO89079 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
CopeO89079 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CopeO89079 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
CopeO89079 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.99□□□□□ -0.49
CopeO89079 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
CopeO89079 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
CopeO89079 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.99□□□□□ -0.49
CopeO89079 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CopeO89079 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
CopeO89079 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CopeO89079 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CopeO89079 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.98□□□□□ -0.49
CopeO89079 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CopeO89079 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CopeO89079 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.98□□□□□ -0.49
CopeO89079 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CopeO89079 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CopeO89079 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CopeO89079 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CopeO89079 Gm23931-201ENSMUST00000103842 109 ntBASIC11.98□□□□□ -0.49
CopeO89079 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.98□□□□□ -0.49
CopeO89079 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC11.98□□□□□ -0.49
CopeO89079 Snora78-201ENSMUST00000158630 128 ntBASIC11.98□□□□□ -0.49
CopeO89079 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CopeO89079 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.98□□□□□ -0.49
CopeO89079 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.98□□□□□ -0.49
CopeO89079 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.98□□□□□ -0.49
CopeO89079 AC153954.1-201ENSMUST00000216959 255 ntBASIC11.98□□□□□ -0.49
CopeO89079 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.98□□□□□ -0.49
CopeO89079 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.98□□□□□ -0.49
CopeO89079 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CopeO89079 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
CopeO89079 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.98□□□□□ -0.49
CopeO89079 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
CopeO89079 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CopeO89079 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
CopeO89079 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CopeO89079 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CopeO89079 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms