Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf13O54965 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf13O54965 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf13O54965 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.56□□□□□ -0.72
Rnf13O54965 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf13O54965 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf13O54965 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.56□□□□□ -0.72
Rnf13O54965 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf13O54965 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf13O54965 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC10.56□□□□□ -0.72
Rnf13O54965 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf13O54965 Gm9728-201ENSMUST00000200197 1055 ntBASIC10.56□□□□□ -0.72
Rnf13O54965 Gm45880-201ENSMUST00000213041 853 ntBASIC10.56□□□□□ -0.72
Rnf13O54965 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Rnf13O54965 AC133598.1-201ENSMUST00000224327 660 ntBASIC10.56□□□□□ -0.72
Rnf13O54965 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf13O54965 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf13O54965 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Rnf13O54965 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf13O54965 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf13O54965 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf13O54965 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf13O54965 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf13O54965 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf13O54965 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf13O54965 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf13O54965 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf13O54965 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf13O54965 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf13O54965 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf13O54965 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf13O54965 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Rnf13O54965 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Rnf13O54965 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Rnf13O54965 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf13O54965 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf13O54965 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf13O54965 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf13O54965 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf13O54965 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf13O54965 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf13O54965 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf13O54965 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
Rnf13O54965 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf13O54965 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf13O54965 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf13O54965 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf13O54965 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf13O54965 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf13O54965 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf13O54965 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf13O54965 Gm25214-201ENSMUST00000104573 129 ntBASIC10.55□□□□□ -0.72
Rnf13O54965 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf13O54965 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf13O54965 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf13O54965 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Rnf13O54965 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.55□□□□□ -0.72
Rnf13O54965 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.55□□□□□ -0.72
Rnf13O54965 Gm37489-201ENSMUST00000191883 159 ntBASIC10.55□□□□□ -0.72
Rnf13O54965 Gm38002-201ENSMUST00000193255 180 ntBASIC10.55□□□□□ -0.72
Rnf13O54965 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.55□□□□□ -0.72
Rnf13O54965 Gm807-202ENSMUST00000224929 408 ntBASIC10.55□□□□□ -0.72
Rnf13O54965 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf13O54965 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf13O54965 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf13O54965 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Rnf13O54965 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Rnf13O54965 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf13O54965 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
Rnf13O54965 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf13O54965 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf13O54965 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf13O54965 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Rnf13O54965 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf13O54965 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf13O54965 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.55□□□□□ -0.72
Rnf13O54965 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC10.55□□□□□ -0.72
Rnf13O54965 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Rnf13O54965 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.55□□□□□ -0.72
Rnf13O54965 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf13O54965 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf13O54965 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Rnf13O54965 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf13O54965 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf13O54965 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.54□□□□□ -0.72
Rnf13O54965 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf13O54965 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.54□□□□□ -0.72
Rnf13O54965 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf13O54965 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf13O54965 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf13O54965 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf13O54965 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf13O54965 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf13O54965 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Rnf13O54965 Gm23931-201ENSMUST00000103842 109 ntBASIC10.54□□□□□ -0.72
Rnf13O54965 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Rnf13O54965 Gm11989-201ENSMUST00000117240 672 ntBASIC10.54□□□□□ -0.72
Rnf13O54965 Gm5187-201ENSMUST00000117317 991 ntBASIC10.54□□□□□ -0.72
Rnf13O54965 Gm11362-201ENSMUST00000118838 850 ntBASIC10.54□□□□□ -0.72
Rnf13O54965 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms