Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Gm37287-201ENSMUST00000195449 695 ntBASIC13.84□□□□□ -0.19
Smarce1O54941 Gm37793-201ENSMUST00000195548 695 ntBASIC13.84□□□□□ -0.19
Smarce1O54941 Aprt-ps-201ENSMUST00000212311 505 ntBASIC13.84□□□□□ -0.19
Smarce1O54941 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC13.84□□□□□ -0.19
Smarce1O54941 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.84□□□□□ -0.19
Smarce1O54941 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarce1O54941 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarce1O54941 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarce1O54941 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarce1O54941 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarce1O54941 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarce1O54941 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarce1O54941 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Smarce1O54941 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarce1O54941 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Smarce1O54941 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarce1O54941 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Smarce1O54941 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC13.84□□□□□ -0.19
Smarce1O54941 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smarce1O54941 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Smarce1O54941 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smarce1O54941 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Smarce1O54941 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Smarce1O54941 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarce1O54941 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarce1O54941 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarce1O54941 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC13.83□□□□□ -0.2
Smarce1O54941 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smarce1O54941 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarce1O54941 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Smarce1O54941 Gm11500-201ENSMUST00000118237 601 ntBASIC13.83□□□□□ -0.2
Smarce1O54941 Gm13326-201ENSMUST00000118730 1011 ntBASIC13.83□□□□□ -0.2
Smarce1O54941 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarce1O54941 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.83□□□□□ -0.2
Smarce1O54941 Ighv4-2-201ENSMUST00000192975 362 ntBASIC13.83□□□□□ -0.2
Smarce1O54941 Gm6450-201ENSMUST00000200896 574 ntBASIC13.83□□□□□ -0.2
Smarce1O54941 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC13.83□□□□□ -0.2
Smarce1O54941 Gm44651-201ENSMUST00000207343 372 ntBASIC13.83□□□□□ -0.2
Smarce1O54941 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.83□□□□□ -0.2
Smarce1O54941 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarce1O54941 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Smarce1O54941 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Smarce1O54941 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarce1O54941 BC043934-202ENSMUST00000185694 2356 ntBASIC13.83□□□□□ -0.2
Smarce1O54941 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarce1O54941 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smarce1O54941 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Smarce1O54941 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Smarce1O54941 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarce1O54941 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarce1O54941 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Smarce1O54941 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.83□□□□□ -0.2
Smarce1O54941 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarce1O54941 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarce1O54941 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarce1O54941 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smarce1O54941 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Smarce1O54941 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smarce1O54941 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC13.82□□□□□ -0.2
Smarce1O54941 Gm1840-201ENSMUST00000051687 1432 ntBASIC13.82□□□□□ -0.2
Smarce1O54941 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC13.82□□□□□ -0.2
Smarce1O54941 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Smarce1O54941 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smarce1O54941 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarce1O54941 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarce1O54941 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC13.82□□□□□ -0.2
Smarce1O54941 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
Smarce1O54941 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarce1O54941 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Smarce1O54941 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
Smarce1O54941 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.82□□□□□ -0.2
Smarce1O54941 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC13.82□□□□□ -0.2
Smarce1O54941 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.82□□□□□ -0.2
Smarce1O54941 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.82□□□□□ -0.2
Smarce1O54941 Gm42629-201ENSMUST00000199063 1102 ntBASIC13.82□□□□□ -0.2
Smarce1O54941 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarce1O54941 AC153962.4-201ENSMUST00000217878 242 ntBASIC13.82□□□□□ -0.2
Smarce1O54941 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarce1O54941 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarce1O54941 Gm10478-201ENSMUST00000084451 396 ntBASIC13.82□□□□□ -0.2
Smarce1O54941 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smarce1O54941 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarce1O54941 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smarce1O54941 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
Smarce1O54941 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Smarce1O54941 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Smarce1O54941 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Smarce1O54941 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarce1O54941 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarce1O54941 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarce1O54941 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC13.81□□□□□ -0.2
Smarce1O54941 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarce1O54941 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Smarce1O54941 Gm22133-201ENSMUST00000102082 109 ntBASIC13.81□□□□□ -0.2
Smarce1O54941 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Smarce1O54941 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Smarce1O54941 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Smarce1O54941 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Smarce1O54941 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Smarce1O54941 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms