Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Polr1aO35134 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Polr1aO35134 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Polr1aO35134 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Polr1aO35134 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Polr1aO35134 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
Polr1aO35134 Gm13094-201ENSMUST00000117930 409 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 Gm5944-201ENSMUST00000118182 1001 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Polr1aO35134 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC17.64■□□□□ 0.41
Polr1aO35134 Snord55-201ENSMUST00000174939 79 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 Gm23647-201ENSMUST00000175042 109 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 Rn5s-201ENSMUST00000177555 119 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 n-R5s108-201ENSMUST00000177575 119 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 n-R5s121-201ENSMUST00000177589 119 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 n-R5s146-201ENSMUST00000177889 119 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 Gm22109-201ENSMUST00000177995 119 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 Gm22291-201ENSMUST00000178027 119 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 n-R5s141-201ENSMUST00000178066 119 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 Gm23284-201ENSMUST00000178069 119 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 n-R5s100-201ENSMUST00000178106 119 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 n-R5s111-201ENSMUST00000178203 119 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 n-R5s105-201ENSMUST00000178499 119 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 n-R5s149-201ENSMUST00000178520 119 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 n-R5s103-201ENSMUST00000178755 119 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 n-R5s123-201ENSMUST00000178804 119 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 n-R5s142-201ENSMUST00000178820 119 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 n-R5s144-201ENSMUST00000178859 119 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 n-R5s139-201ENSMUST00000178975 119 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 n-R5s134-201ENSMUST00000178983 119 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 n-R5s136-201ENSMUST00000179080 119 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 Gm25018-201ENSMUST00000179081 119 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 n-R5s104-201ENSMUST00000179107 119 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 n-R5s113-201ENSMUST00000179143 119 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 n-R5s133-201ENSMUST00000179275 119 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 n-R5s117-201ENSMUST00000179431 119 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 Gm25212-201ENSMUST00000179432 119 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 n-R5s138-201ENSMUST00000179476 119 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 n-R5s122-201ENSMUST00000179500 119 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 n-R5s143-201ENSMUST00000179542 119 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 n-R5s107-201ENSMUST00000179704 119 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 Gm26391-201ENSMUST00000179843 119 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 n-R5s110-201ENSMUST00000179995 119 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 n-R5s128-201ENSMUST00000180096 119 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 n-R5s124-201ENSMUST00000180334 119 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Polr1aO35134 Gm6352-201ENSMUST00000203583 1134 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 Gm10254-201ENSMUST00000052888 867 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 Mir326-201ENSMUST00000083637 95 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 Gm24089-201ENSMUST00000093696 109 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 Gm10580-201ENSMUST00000097985 396 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 Gm10582-201ENSMUST00000097987 396 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 Gm10583-201ENSMUST00000097988 396 ntBASIC17.64■□□□□ 0.41
Polr1aO35134 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Polr1aO35134 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Polr1aO35134 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Polr1aO35134 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Polr1aO35134 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Polr1aO35134 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Polr1aO35134 Gm44153-201ENSMUST00000204162 1580 ntBASIC17.63■□□□□ 0.41
Polr1aO35134 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Polr1aO35134 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Polr1aO35134 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Polr1aO35134 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Polr1aO35134 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Polr1aO35134 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC17.63■□□□□ 0.41
Polr1aO35134 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Polr1aO35134 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Polr1aO35134 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Polr1aO35134 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Polr1aO35134 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Polr1aO35134 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Polr1aO35134 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Polr1aO35134 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Polr1aO35134 Gm23745-201ENSMUST00000104230 125 ntBASIC17.63■□□□□ 0.41
Polr1aO35134 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Polr1aO35134 Gm6758-201ENSMUST00000119643 1055 ntBASIC17.63■□□□□ 0.41
Polr1aO35134 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC17.63■□□□□ 0.41
Polr1aO35134 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Polr1aO35134 Ighv5-8-202ENSMUST00000191967 337 ntBASIC17.63■□□□□ 0.41
Polr1aO35134 Gm44605-201ENSMUST00000206892 949 ntBASIC17.63■□□□□ 0.41
Polr1aO35134 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Polr1aO35134 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Polr1aO35134 Gm42970-201ENSMUST00000196407 1352 ntBASIC17.63■□□□□ 0.41
Polr1aO35134 CT009757.3-201ENSMUST00000223367 2320 ntBASIC17.63■□□□□ 0.41
Polr1aO35134 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Polr1aO35134 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC17.63■□□□□ 0.41
Polr1aO35134 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Polr1aO35134 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Polr1aO35134 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Polr1aO35134 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Polr1aO35134 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Polr1aO35134 AC022682.1-201ENSMUST00000224624 2023 ntBASIC17.62■□□□□ 0.41
Polr1aO35134 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Polr1aO35134 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC17.62■□□□□ 0.41
Polr1aO35134 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Polr1aO35134 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Polr1aO35134 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Polr1aO35134 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 106.2 ms