Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf11bO08712 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf11bO08712 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf11bO08712 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf11bO08712 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf11bO08712 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf11bO08712 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf11bO08712 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Tnfrsf11bO08712 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf11bO08712 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf11bO08712 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Tnfrsf11bO08712 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf11bO08712 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf11bO08712 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf11bO08712 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 Gm11500-201ENSMUST00000118237 601 ntBASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf11bO08712 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Gm26361-201ENSMUST00000158868 186 ntBASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Gm29615-201ENSMUST00000185371 697 ntBASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Gm28224-201ENSMUST00000186078 697 ntBASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Gm29001-201ENSMUST00000186177 697 ntBASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Gm28292-201ENSMUST00000186593 697 ntBASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Gm28101-201ENSMUST00000187608 697 ntBASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Gm29076-201ENSMUST00000187689 697 ntBASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Gm28302-201ENSMUST00000187931 697 ntBASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Gm28646-201ENSMUST00000188220 697 ntBASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Gm28205-201ENSMUST00000189177 697 ntBASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Gm29032-201ENSMUST00000189797 697 ntBASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Gm28695-201ENSMUST00000190300 697 ntBASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Gm37448-201ENSMUST00000192795 697 ntBASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Gm37259-201ENSMUST00000193903 849 ntBASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Tnfrsf11bO08712 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms