Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Shisa8J3QNX5 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shisa8J3QNX5 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC10.62□□□□□ -0.71
Shisa8J3QNX5 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shisa8J3QNX5 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shisa8J3QNX5 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.62□□□□□ -0.71
Shisa8J3QNX5 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Shisa8J3QNX5 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Shisa8J3QNX5 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Shisa8J3QNX5 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Gm15163-201ENSMUST00000120749 1302 ntBASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Gm6114-201ENSMUST00000182472 968 ntBASIC10.61□□□□□ -0.71
Shisa8J3QNX5 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Gm4864-201ENSMUST00000219894 1461 ntBASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Shisa8J3QNX5 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Gm42602-201ENSMUST00000200288 3224 ntBASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Gm38241-201ENSMUST00000192641 898 ntBASIC10.6□□□□□ -0.71
Shisa8J3QNX5 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 AC113031.8-201ENSMUST00000227856 631 ntBASIC10.6□□□□□ -0.71
Shisa8J3QNX5 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Shisa8J3QNX5 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC10.6□□□□□ -0.71
Shisa8J3QNX5 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms