Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 AC173482.6-201ENSMUST00000225889 1741 ntBASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Syngap1F6SEU4 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Syngap1F6SEU4 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Syngap1F6SEU4 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Syngap1F6SEU4 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Syngap1F6SEU4 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Syngap1F6SEU4 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Syngap1F6SEU4 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Syngap1F6SEU4 Gm16305-201ENSMUST00000140747 556 ntBASIC13.16□□□□□ -0.3
Syngap1F6SEU4 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC13.16□□□□□ -0.3
Syngap1F6SEU4 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC13.16□□□□□ -0.3
Syngap1F6SEU4 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC13.16□□□□□ -0.3
Syngap1F6SEU4 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Syngap1F6SEU4 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC13.16□□□□□ -0.3
Syngap1F6SEU4 Mir6407-201ENSMUST00000184510 101 ntBASIC13.16□□□□□ -0.3
Syngap1F6SEU4 Gm3551-201ENSMUST00000190750 664 ntBASIC13.16□□□□□ -0.3
Syngap1F6SEU4 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.16□□□□□ -0.3
Syngap1F6SEU4 Gm37852-201ENSMUST00000193027 350 ntBASIC13.16□□□□□ -0.3
Syngap1F6SEU4 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC13.16□□□□□ -0.3
Syngap1F6SEU4 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Syngap1F6SEU4 Gm45410-201ENSMUST00000211331 1093 ntBASIC13.16□□□□□ -0.3
Syngap1F6SEU4 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC13.16□□□□□ -0.3
Syngap1F6SEU4 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC13.16□□□□□ -0.3
Syngap1F6SEU4 AC138716.2-201ENSMUST00000226670 1016 ntBASIC13.16□□□□□ -0.3
Syngap1F6SEU4 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Syngap1F6SEU4 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Syngap1F6SEU4 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Syngap1F6SEU4 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Syngap1F6SEU4 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Syngap1F6SEU4 Gm38344-201ENSMUST00000195306 1353 ntBASIC13.16□□□□□ -0.3
Syngap1F6SEU4 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Syngap1F6SEU4 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Syngap1F6SEU4 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Syngap1F6SEU4 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Syngap1F6SEU4 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Syngap1F6SEU4 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Syngap1F6SEU4 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.16□□□□□ -0.3
Syngap1F6SEU4 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Syngap1F6SEU4 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Syngap1F6SEU4 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.16□□□□□ -0.3
Syngap1F6SEU4 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Syngap1F6SEU4 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Syngap1F6SEU4 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Syngap1F6SEU4 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.15□□□□□ -0.3
Syngap1F6SEU4 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.15□□□□□ -0.3
Syngap1F6SEU4 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Syngap1F6SEU4 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Syngap1F6SEU4 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Syngap1F6SEU4 Gm15566-201ENSMUST00000121130 590 ntBASIC13.15□□□□□ -0.3
Syngap1F6SEU4 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Syngap1F6SEU4 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Syngap1F6SEU4 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC13.15□□□□□ -0.3
Syngap1F6SEU4 Gm26957-201ENSMUST00000182645 977 ntBASIC13.15□□□□□ -0.3
Syngap1F6SEU4 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Syngap1F6SEU4 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Syngap1F6SEU4 Gm37458-201ENSMUST00000194055 410 ntBASIC13.15□□□□□ -0.3
Syngap1F6SEU4 Gm6450-201ENSMUST00000200896 574 ntBASIC13.15□□□□□ -0.3
Syngap1F6SEU4 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC13.15□□□□□ -0.3
Syngap1F6SEU4 Gm18123-201ENSMUST00000210874 822 ntBASIC13.15□□□□□ -0.3
Syngap1F6SEU4 Gm6390-201ENSMUST00000215034 589 ntBASIC13.15□□□□□ -0.3
Syngap1F6SEU4 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC13.15□□□□□ -0.3
Syngap1F6SEU4 AC129308.3-201ENSMUST00000225652 524 ntBASIC13.15□□□□□ -0.3
Syngap1F6SEU4 AC102368.1-201ENSMUST00000227161 892 ntBASIC13.15□□□□□ -0.3
Syngap1F6SEU4 AC105408.1-201ENSMUST00000227771 802 ntBASIC13.15□□□□□ -0.3
Syngap1F6SEU4 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Syngap1F6SEU4 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Syngap1F6SEU4 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Syngap1F6SEU4 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Syngap1F6SEU4 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Syngap1F6SEU4 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Syngap1F6SEU4 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.15□□□□□ -0.3
Syngap1F6SEU4 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Syngap1F6SEU4 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Syngap1F6SEU4 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.15□□□□□ -0.3
Syngap1F6SEU4 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Syngap1F6SEU4 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Syngap1F6SEU4 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms