Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Snord17-201ENSMUST00000104526 238 ntBASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Gm11981-201ENSMUST00000139769 664 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC11.8□□□□□ -0.52
Col4a6B1AVK5 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Gm8384-201ENSMUST00000190905 704 ntBASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Gm37207-201ENSMUST00000194284 296 ntBASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Gm43002-201ENSMUST00000200310 155 ntBASIC11.8□□□□□ -0.52
Col4a6B1AVK5 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Gm10254-201ENSMUST00000052888 867 ntBASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Rps3a2-201ENSMUST00000074245 792 ntBASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Rps3a3-201ENSMUST00000074680 795 ntBASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a6B1AVK5 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Col4a6B1AVK5 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Col4a6B1AVK5 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Gm43966-201ENSMUST00000203301 612 ntBASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a6B1AVK5 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Btrc-209ENSMUST00000224478 2194 ntBASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Col4a6B1AVK5 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Gm11952-201ENSMUST00000121172 821 ntBASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Gm14052-201ENSMUST00000121434 1031 ntBASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Mup-ps29-201ENSMUST00000122281 202 ntBASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Gm9625-201ENSMUST00000180422 955 ntBASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Gm42867-201ENSMUST00000202995 469 ntBASIC11.78□□□□□ -0.52
Col4a6B1AVK5 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 AC164556.1-201ENSMUST00000221318 751 ntBASIC11.78□□□□□ -0.52
Col4a6B1AVK5 AC154435.1-201ENSMUST00000223938 959 ntBASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Gm10580-201ENSMUST00000097985 396 ntBASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Gm10582-201ENSMUST00000097987 396 ntBASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Gm10583-201ENSMUST00000097988 396 ntBASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col4a6B1AVK5 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms