Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm17709-201ENSMUST00000174536 1096 ntBASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 Gm17877-201ENSMUST00000192578 814 ntBASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 Gm30671-201ENSMUST00000214898 318 ntBASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Scn8aQ9WTU3 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Gm3017-201ENSMUST00000203603 1126 ntBASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Gm10752-201ENSMUST00000218348 729 ntBASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Mirlet7i-201ENSMUST00000083472 85 ntBASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 AC135114.1-201ENSMUST00000228682 270 ntBASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Scn8aQ9WTU3 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Scn8aQ9WTU3 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms