Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tubb3Q9ERD7 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Rprl1-201ENSMUST00000158050 327 ntBASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Gm7003-201ENSMUST00000195089 312 ntBASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Gm18711-201ENSMUST00000199341 750 ntBASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 AY036118-201ENSMUST00000200021 923 ntBASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tubb3Q9ERD7 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 Gm12266-201ENSMUST00000120311 962 ntBASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 Gm37666-201ENSMUST00000194110 866 ntBASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 Gm10254-201ENSMUST00000052888 867 ntBASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Tubb3Q9ERD7 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms