Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Cdc40Q9DC48 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdc40Q9DC48 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Gm13035-201ENSMUST00000117496 342 ntBASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Gm12164-201ENSMUST00000121695 551 ntBASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Gm9211-201ENSMUST00000182882 975 ntBASIC10.89□□□□□ -0.67
Cdc40Q9DC48 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC10.89□□□□□ -0.67
Cdc40Q9DC48 AC159819.2-201ENSMUST00000216151 342 ntBASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Gm807-202ENSMUST00000224929 408 ntBASIC10.89□□□□□ -0.67
Cdc40Q9DC48 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdc40Q9DC48 AC154276.3-201ENSMUST00000227643 998 ntBASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Ntng1-201ENSMUST00000051253 327 ntBASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Gm5455-201ENSMUST00000058710 715 ntBASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Gm26448-201ENSMUST00000082446 203 ntBASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Gm10702-201ENSMUST00000098929 1268 ntBASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdc40Q9DC48 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdc40Q9DC48 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdc40Q9DC48 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Gm43081-201ENSMUST00000199082 1380 ntBASIC10.89□□□□□ -0.67
Cdc40Q9DC48 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Cdc40Q9DC48 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Gm8155-201ENSMUST00000216363 1612 ntBASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Gm13408-201ENSMUST00000119822 798 ntBASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Gm13935-201ENSMUST00000121859 798 ntBASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 CT009718.3-201ENSMUST00000221116 367 ntBASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Gm29787-201ENSMUST00000222129 849 ntBASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Gm14267-206ENSMUST00000226870 1209 ntBASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Cdc40Q9DC48 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Exo1-201ENSMUST00000039725 7796 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Cdc40Q9DC48 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms