Protein–RNA interactions for Protein: Q9DBU5

Rnf6, E3 ubiquitin-protein ligase RNF6, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf6Q9DBU5 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rnf6Q9DBU5 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.52□□□□□ -0.4
Rnf6Q9DBU5 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.52□□□□□ -0.4
Rnf6Q9DBU5 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Rnf6Q9DBU5 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf6Q9DBU5 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Rnf6Q9DBU5 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Rnf6Q9DBU5 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Rnf6Q9DBU5 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.52□□□□□ -0.4
Rnf6Q9DBU5 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Rnf6Q9DBU5 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Rnf6Q9DBU5 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf6Q9DBU5 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf6Q9DBU5 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf6Q9DBU5 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf6Q9DBU5 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
Rnf6Q9DBU5 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf6Q9DBU5 Gm13263-201ENSMUST00000121271 838 ntBASIC12.52□□□□□ -0.41
Rnf6Q9DBU5 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.52□□□□□ -0.41
Rnf6Q9DBU5 Gm24990-201ENSMUST00000157406 323 ntBASIC12.52□□□□□ -0.41
Rnf6Q9DBU5 Gm18734-201ENSMUST00000172937 808 ntBASIC12.52□□□□□ -0.41
Rnf6Q9DBU5 Gm10807-201ENSMUST00000177134 795 ntBASIC12.52□□□□□ -0.41
Rnf6Q9DBU5 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf6Q9DBU5 Gm27552-201ENSMUST00000183351 62 ntBASIC12.52□□□□□ -0.41
Rnf6Q9DBU5 Gm27844-201ENSMUST00000183613 62 ntBASIC12.52□□□□□ -0.41
Rnf6Q9DBU5 AU022133-201ENSMUST00000200601 873 ntBASIC12.52□□□□□ -0.41
Rnf6Q9DBU5 Gm43966-201ENSMUST00000203301 612 ntBASIC12.52□□□□□ -0.41
Rnf6Q9DBU5 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf6Q9DBU5 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf6Q9DBU5 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf6Q9DBU5 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.52□□□□□ -0.41
Rnf6Q9DBU5 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Rnf6Q9DBU5 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Rnf6Q9DBU5 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf6Q9DBU5 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
Rnf6Q9DBU5 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf6Q9DBU5 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.52□□□□□ -0.41
Rnf6Q9DBU5 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf6Q9DBU5 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf6Q9DBU5 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf6Q9DBU5 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf6Q9DBU5 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Rnf6Q9DBU5 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 Gm15515-201ENSMUST00000117827 822 ntBASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 Gm27341-201ENSMUST00000183570 106 ntBASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 Gm28450-201ENSMUST00000187349 638 ntBASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 Gm38151-201ENSMUST00000195085 289 ntBASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 Gm6108-201ENSMUST00000208365 367 ntBASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.51□□□□□ -0.41
Rnf6Q9DBU5 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms