Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp4cQ9D7F7 Gm38187-201ENSMUST00000195609 4709 ntBASIC13.98□□□□□ -0.17
Chmp4cQ9D7F7 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp4cQ9D7F7 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp4cQ9D7F7 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.98□□□□□ -0.17
Chmp4cQ9D7F7 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp4cQ9D7F7 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp4cQ9D7F7 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Chmp4cQ9D7F7 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Gm14723-201ENSMUST00000118686 215 ntBASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Gm11222-201ENSMUST00000119005 738 ntBASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Gm38341-201ENSMUST00000195357 515 ntBASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 AC161537.1-201ENSMUST00000226199 1015 ntBASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Chmp4cQ9D7F7 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Chmp4cQ9D7F7 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp4cQ9D7F7 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Chmp4cQ9D7F7 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Chmp4cQ9D7F7 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp4cQ9D7F7 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp4cQ9D7F7 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp4cQ9D7F7 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp4cQ9D7F7 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC13.96□□□□□ -0.17
Chmp4cQ9D7F7 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp4cQ9D7F7 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp4cQ9D7F7 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Chmp4cQ9D7F7 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Chmp4cQ9D7F7 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp4cQ9D7F7 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Chmp4cQ9D7F7 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp4cQ9D7F7 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp4cQ9D7F7 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp4cQ9D7F7 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.96□□□□□ -0.17
Chmp4cQ9D7F7 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC13.96□□□□□ -0.17
Chmp4cQ9D7F7 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.96□□□□□ -0.17
Chmp4cQ9D7F7 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Chmp4cQ9D7F7 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp4cQ9D7F7 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.96□□□□□ -0.17
Chmp4cQ9D7F7 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.96□□□□□ -0.17
Chmp4cQ9D7F7 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp4cQ9D7F7 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Chmp4cQ9D7F7 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.96□□□□□ -0.17
Chmp4cQ9D7F7 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp4cQ9D7F7 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Chmp4cQ9D7F7 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Chmp4cQ9D7F7 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Chmp4cQ9D7F7 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Chmp4cQ9D7F7 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.18
Chmp4cQ9D7F7 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Chmp4cQ9D7F7 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
Chmp4cQ9D7F7 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
Chmp4cQ9D7F7 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Chmp4cQ9D7F7 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Chmp4cQ9D7F7 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
Chmp4cQ9D7F7 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Chmp4cQ9D7F7 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Chmp4cQ9D7F7 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Chmp4cQ9D7F7 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms