Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3a3Q9D554 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Sf3a3Q9D554 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3a3Q9D554 Gm11439-201ENSMUST00000118598 409 ntBASIC11.76□□□□□ -0.53
Sf3a3Q9D554 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.76□□□□□ -0.53
Sf3a3Q9D554 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3a3Q9D554 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3a3Q9D554 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.76□□□□□ -0.53
Sf3a3Q9D554 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3a3Q9D554 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC11.76□□□□□ -0.53
Sf3a3Q9D554 Gm5781-201ENSMUST00000219792 443 ntBASIC11.76□□□□□ -0.53
Sf3a3Q9D554 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.76□□□□□ -0.53
Sf3a3Q9D554 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC11.76□□□□□ -0.53
Sf3a3Q9D554 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.76□□□□□ -0.53
Sf3a3Q9D554 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3a3Q9D554 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.76□□□□□ -0.53
Sf3a3Q9D554 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3a3Q9D554 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3a3Q9D554 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3a3Q9D554 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3a3Q9D554 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3a3Q9D554 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3a3Q9D554 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3a3Q9D554 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3a3Q9D554 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3a3Q9D554 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3a3Q9D554 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3a3Q9D554 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3a3Q9D554 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Sf3a3Q9D554 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3a3Q9D554 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.76□□□□□ -0.53
Sf3a3Q9D554 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.76□□□□□ -0.53
Sf3a3Q9D554 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3a3Q9D554 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC11.76□□□□□ -0.53
Sf3a3Q9D554 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sf3a3Q9D554 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Gm5904-201ENSMUST00000210286 865 ntBASIC11.75□□□□□ -0.53
Sf3a3Q9D554 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC11.75□□□□□ -0.53
Sf3a3Q9D554 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 AA474408-201ENSMUST00000098110 3339 ntBASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Mir692-1-201ENSMUST00000102263 109 ntBASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Gm23912-201ENSMUST00000104687 87 ntBASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.74□□□□□ -0.53
Sf3a3Q9D554 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms