Protein–RNA interactions for Protein: Q9D394

Rufy3, Protein RUFY3, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rufy3Q9D394 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rufy3Q9D394 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC13.67□□□□□ -0.22
Rufy3Q9D394 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rufy3Q9D394 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Rufy3Q9D394 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rufy3Q9D394 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rufy3Q9D394 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rufy3Q9D394 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rufy3Q9D394 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rufy3Q9D394 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rufy3Q9D394 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Rufy3Q9D394 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Rufy3Q9D394 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rufy3Q9D394 Gm23949-201ENSMUST00000104027 127 ntBASIC13.67□□□□□ -0.22
Rufy3Q9D394 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Rufy3Q9D394 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Rufy3Q9D394 Gm11439-201ENSMUST00000118598 409 ntBASIC13.67□□□□□ -0.22
Rufy3Q9D394 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rufy3Q9D394 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rufy3Q9D394 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.67□□□□□ -0.22
Rufy3Q9D394 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC13.67□□□□□ -0.22
Rufy3Q9D394 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rufy3Q9D394 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rufy3Q9D394 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rufy3Q9D394 Gm26448-201ENSMUST00000082446 203 ntBASIC13.67□□□□□ -0.22
Rufy3Q9D394 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Rufy3Q9D394 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Rufy3Q9D394 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rufy3Q9D394 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rufy3Q9D394 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rufy3Q9D394 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rufy3Q9D394 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rufy3Q9D394 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rufy3Q9D394 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Rufy3Q9D394 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Rufy3Q9D394 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Rufy3Q9D394 Gm37122-201ENSMUST00000195313 1567 ntBASIC13.66□□□□□ -0.22
Rufy3Q9D394 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rufy3Q9D394 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rufy3Q9D394 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Rufy3Q9D394 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rufy3Q9D394 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rufy3Q9D394 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rufy3Q9D394 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Rufy3Q9D394 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rufy3Q9D394 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rufy3Q9D394 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC13.66□□□□□ -0.22
Rufy3Q9D394 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rufy3Q9D394 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rufy3Q9D394 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rufy3Q9D394 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.66□□□□□ -0.22
Rufy3Q9D394 Gm14071-201ENSMUST00000117817 509 ntBASIC13.66□□□□□ -0.22
Rufy3Q9D394 Gm15711-201ENSMUST00000118889 535 ntBASIC13.66□□□□□ -0.22
Rufy3Q9D394 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rufy3Q9D394 Cd63-ps-202ENSMUST00000154992 717 ntBASIC13.66□□□□□ -0.22
Rufy3Q9D394 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.66□□□□□ -0.22
Rufy3Q9D394 Gm28686-201ENSMUST00000187404 609 ntBASIC13.66□□□□□ -0.22
Rufy3Q9D394 Rps4l-202ENSMUST00000204242 789 ntBASIC13.66□□□□□ -0.22
Rufy3Q9D394 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.66□□□□□ -0.22
Rufy3Q9D394 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.66□□□□□ -0.22
Rufy3Q9D394 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rufy3Q9D394 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Rufy3Q9D394 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rufy3Q9D394 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC13.66□□□□□ -0.22
Rufy3Q9D394 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rufy3Q9D394 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rufy3Q9D394 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rufy3Q9D394 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rufy3Q9D394 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rufy3Q9D394 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rufy3Q9D394 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Rufy3Q9D394 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Rufy3Q9D394 Gm43127-201ENSMUST00000195890 2789 ntBASIC13.66□□□□□ -0.22
Rufy3Q9D394 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Rufy3Q9D394 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rufy3Q9D394 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rufy3Q9D394 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rufy3Q9D394 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rufy3Q9D394 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rufy3Q9D394 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rufy3Q9D394 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rufy3Q9D394 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rufy3Q9D394 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rufy3Q9D394 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rufy3Q9D394 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rufy3Q9D394 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rufy3Q9D394 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rufy3Q9D394 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC13.65□□□□□ -0.22
Rufy3Q9D394 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.65□□□□□ -0.22
Rufy3Q9D394 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rufy3Q9D394 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.65□□□□□ -0.22
Rufy3Q9D394 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rufy3Q9D394 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rufy3Q9D394 Gm3332-201ENSMUST00000189337 928 ntBASIC13.65□□□□□ -0.22
Rufy3Q9D394 Gm18038-201ENSMUST00000197900 485 ntBASIC13.65□□□□□ -0.22
Rufy3Q9D394 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC13.65□□□□□ -0.22
Rufy3Q9D394 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.65□□□□□ -0.22
Rufy3Q9D394 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.65□□□□□ -0.22
Rufy3Q9D394 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Rufy3Q9D394 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms