Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm42997-202ENSMUST00000200321 985 ntBASIC12□□□□□ -0.49
Vps28Q9D1C8 Gm44100-201ENSMUST00000204329 436 ntBASIC12□□□□□ -0.49
Vps28Q9D1C8 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12□□□□□ -0.49
Vps28Q9D1C8 Gm45909-201ENSMUST00000212413 1031 ntBASIC12□□□□□ -0.49
Vps28Q9D1C8 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps28Q9D1C8 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC12□□□□□ -0.49
Vps28Q9D1C8 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Vps28Q9D1C8 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Vps28Q9D1C8 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps28Q9D1C8 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps28Q9D1C8 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Vps28Q9D1C8 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps28Q9D1C8 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps28Q9D1C8 Gm45428-201ENSMUST00000209619 1789 ntBASIC12□□□□□ -0.49
Vps28Q9D1C8 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12□□□□□ -0.49
Vps28Q9D1C8 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps28Q9D1C8 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Vps28Q9D1C8 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Gm13045-201ENSMUST00000119019 712 ntBASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Gm15432-201ENSMUST00000121106 195 ntBASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Gm5714-201ENSMUST00000197343 566 ntBASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Ginm1-202ENSMUST00000065124 300 ntBASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.99□□□□□ -0.49
Vps28Q9D1C8 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Vps28Q9D1C8 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps28Q9D1C8 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Vps28Q9D1C8 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Vps28Q9D1C8 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps28Q9D1C8 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps28Q9D1C8 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vps28Q9D1C8 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps28Q9D1C8 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vps28Q9D1C8 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.98□□□□□ -0.49
Vps28Q9D1C8 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps28Q9D1C8 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.98□□□□□ -0.49
Vps28Q9D1C8 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.98□□□□□ -0.49
Vps28Q9D1C8 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.98□□□□□ -0.49
Vps28Q9D1C8 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps28Q9D1C8 AC138329.2-201ENSMUST00000225579 1842 ntBASIC11.98□□□□□ -0.49
Vps28Q9D1C8 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps28Q9D1C8 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Vps28Q9D1C8 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Vps28Q9D1C8 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps28Q9D1C8 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vps28Q9D1C8 AC108858.2-201ENSMUST00000228186 1425 ntBASIC11.98□□□□□ -0.49
Vps28Q9D1C8 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps28Q9D1C8 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vps28Q9D1C8 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Vps28Q9D1C8 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.98□□□□□ -0.49
Vps28Q9D1C8 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.98□□□□□ -0.49
Vps28Q9D1C8 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.98□□□□□ -0.49
Vps28Q9D1C8 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vps28Q9D1C8 Gm10051-201ENSMUST00000145209 414 ntBASIC11.98□□□□□ -0.49
Vps28Q9D1C8 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vps28Q9D1C8 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Vps28Q9D1C8 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms