Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Shmt2Q9CZN7 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Gm13996-201ENSMUST00000118456 430 ntBASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Gm18212-201ENSMUST00000211678 889 ntBASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Shmt2Q9CZN7 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Shmt2Q9CZN7 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shmt2Q9CZN7 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Shmt2Q9CZN7 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.16□□□□□ -0.62
Shmt2Q9CZN7 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.16□□□□□ -0.62
Shmt2Q9CZN7 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shmt2Q9CZN7 Gm43937-201ENSMUST00000204640 3122 ntBASIC11.16□□□□□ -0.62
Shmt2Q9CZN7 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Shmt2Q9CZN7 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Shmt2Q9CZN7 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms