Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Erich3-203ENSMUST00000189969 3460 ntBASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Gm25214-201ENSMUST00000104573 129 ntBASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Mir8093-201ENSMUST00000185043 137 ntBASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Gm32390-201ENSMUST00000212713 1172 ntBASIC11.59□□□□□ -0.55
Ssu72Q9CY97 AC141438.2-201ENSMUST00000215068 271 ntBASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Gm37613-201ENSMUST00000195677 3580 ntBASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ssu72Q9CY97 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Ssu72Q9CY97 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Ssu72Q9CY97 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Ssu72Q9CY97 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.55
Ssu72Q9CY97 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Ssu72Q9CY97 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ssu72Q9CY97 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Ssu72Q9CY97 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.58□□□□□ -0.56
Ssu72Q9CY97 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ssu72Q9CY97 Gm11478-201ENSMUST00000117851 599 ntBASIC11.58□□□□□ -0.56
Ssu72Q9CY97 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.58□□□□□ -0.56
Ssu72Q9CY97 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ssu72Q9CY97 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.58□□□□□ -0.56
Ssu72Q9CY97 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.58□□□□□ -0.56
Ssu72Q9CY97 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Ssu72Q9CY97 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.58□□□□□ -0.56
Ssu72Q9CY97 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.58□□□□□ -0.56
Ssu72Q9CY97 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ssu72Q9CY97 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.58□□□□□ -0.56
Ssu72Q9CY97 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.58□□□□□ -0.56
Ssu72Q9CY97 Gm7293-201ENSMUST00000216682 1007 ntBASIC11.58□□□□□ -0.56
Ssu72Q9CY97 AC126253.1-201ENSMUST00000227974 824 ntBASIC11.58□□□□□ -0.56
Ssu72Q9CY97 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ssu72Q9CY97 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Ssu72Q9CY97 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Ssu72Q9CY97 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.58□□□□□ -0.56
Ssu72Q9CY97 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ssu72Q9CY97 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ssu72Q9CY97 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ssu72Q9CY97 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.58□□□□□ -0.56
Ssu72Q9CY97 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ssu72Q9CY97 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ssu72Q9CY97 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Ssu72Q9CY97 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.58□□□□□ -0.56
Ssu72Q9CY97 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.58□□□□□ -0.56
Ssu72Q9CY97 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Ssu72Q9CY97 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ssu72Q9CY97 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Ssu72Q9CY97 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.58□□□□□ -0.56
Ssu72Q9CY97 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Ssu72Q9CY97 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Ssu72Q9CY97 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms