Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Gm15329-201ENSMUST00000121408 155 ntBASIC14.39□□□□□ -0.11
Trim34aQ99PP6 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim34aQ99PP6 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim34aQ99PP6 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC14.39□□□□□ -0.11
Trim34aQ99PP6 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim34aQ99PP6 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim34aQ99PP6 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trim34aQ99PP6 Pbld1-206ENSMUST00000219687 788 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim34aQ99PP6 AC122346.3-201ENSMUST00000223983 306 ntBASIC14.39□□□□□ -0.11
Trim34aQ99PP6 CT030653.1-201ENSMUST00000224382 1279 ntBASIC14.39□□□□□ -0.11
Trim34aQ99PP6 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim34aQ99PP6 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim34aQ99PP6 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim34aQ99PP6 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim34aQ99PP6 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.39□□□□□ -0.11
Trim34aQ99PP6 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim34aQ99PP6 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim34aQ99PP6 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim34aQ99PP6 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim34aQ99PP6 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim34aQ99PP6 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim34aQ99PP6 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim34aQ99PP6 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim34aQ99PP6 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC14.39□□□□□ -0.11
Trim34aQ99PP6 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim34aQ99PP6 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim34aQ99PP6 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim34aQ99PP6 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim34aQ99PP6 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trim34aQ99PP6 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trim34aQ99PP6 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Ptprm-203ENSMUST00000224091 3773 ntBASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Gm38089-201ENSMUST00000193585 1514 ntBASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Gm4294-201ENSMUST00000105169 614 ntBASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC14.38□□□□□ -0.11
Trim34aQ99PP6 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Gm14270-201ENSMUST00000118388 846 ntBASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Gm16219-201ENSMUST00000120096 274 ntBASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Trim34aQ99PP6 CT009527.1-201ENSMUST00000224205 339 ntBASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim34aQ99PP6 AC138329.2-201ENSMUST00000225579 1842 ntBASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim34aQ99PP6 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trim34aQ99PP6 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim34aQ99PP6 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trim34aQ99PP6 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim34aQ99PP6 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trim34aQ99PP6 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim34aQ99PP6 Gm45428-201ENSMUST00000209619 1789 ntBASIC14.37□□□□□ -0.11
Trim34aQ99PP6 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim34aQ99PP6 Gm17213-201ENSMUST00000165161 1360 ntBASIC14.37□□□□□ -0.11
Trim34aQ99PP6 AC158636.1-201ENSMUST00000220118 1393 ntBASIC14.37□□□□□ -0.11
Trim34aQ99PP6 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim34aQ99PP6 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim34aQ99PP6 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim34aQ99PP6 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim34aQ99PP6 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim34aQ99PP6 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim34aQ99PP6 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim34aQ99PP6 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim34aQ99PP6 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim34aQ99PP6 Gm11801-201ENSMUST00000117807 746 ntBASIC14.37□□□□□ -0.11
Trim34aQ99PP6 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC14.37□□□□□ -0.11
Trim34aQ99PP6 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC14.37□□□□□ -0.11
Trim34aQ99PP6 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trim34aQ99PP6 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC14.37□□□□□ -0.11
Trim34aQ99PP6 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC14.37□□□□□ -0.11
Trim34aQ99PP6 Gm43163-201ENSMUST00000196571 442 ntBASIC14.37□□□□□ -0.11
Trim34aQ99PP6 Gm43692-201ENSMUST00000198236 1062 ntBASIC14.37□□□□□ -0.11
Trim34aQ99PP6 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim34aQ99PP6 CT010506.1-201ENSMUST00000223673 349 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms