Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Gm15207-201ENSMUST00000119259 442 ntBASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Gm23699-201ENSMUST00000158835 135 ntBASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 AU022133-201ENSMUST00000200601 873 ntBASIC12.57□□□□□ -0.4
Tlr3Q99MB1 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tlr3Q99MB1 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tlr3Q99MB1 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Tlr3Q99MB1 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tlr3Q99MB1 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.56□□□□□ -0.4
Tlr3Q99MB1 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Tlr3Q99MB1 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.56□□□□□ -0.4
Tlr3Q99MB1 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.56□□□□□ -0.4
Tlr3Q99MB1 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tlr3Q99MB1 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tlr3Q99MB1 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tlr3Q99MB1 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tlr3Q99MB1 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Tlr3Q99MB1 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tlr3Q99MB1 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tlr3Q99MB1 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tlr3Q99MB1 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.56□□□□□ -0.4
Tlr3Q99MB1 Gm11663-201ENSMUST00000117888 290 ntBASIC12.56□□□□□ -0.4
Tlr3Q99MB1 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.56□□□□□ -0.4
Tlr3Q99MB1 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.56□□□□□ -0.4
Tlr3Q99MB1 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.56□□□□□ -0.4
Tlr3Q99MB1 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC12.56□□□□□ -0.4
Tlr3Q99MB1 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tlr3Q99MB1 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.56□□□□□ -0.4
Tlr3Q99MB1 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tlr3Q99MB1 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tlr3Q99MB1 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Tlr3Q99MB1 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tlr3Q99MB1 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Tlr3Q99MB1 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tlr3Q99MB1 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tlr3Q99MB1 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Tlr3Q99MB1 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tlr3Q99MB1 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.56□□□□□ -0.4
Tlr3Q99MB1 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tlr3Q99MB1 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tlr3Q99MB1 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Tlr3Q99MB1 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tlr3Q99MB1 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tlr3Q99MB1 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tlr3Q99MB1 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.55□□□□□ -0.4
Tlr3Q99MB1 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tlr3Q99MB1 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Tlr3Q99MB1 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tlr3Q99MB1 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tlr3Q99MB1 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tlr3Q99MB1 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Tlr3Q99MB1 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tlr3Q99MB1 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.55□□□□□ -0.4
Tlr3Q99MB1 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tlr3Q99MB1 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Tlr3Q99MB1 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.55□□□□□ -0.4
Tlr3Q99MB1 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.55□□□□□ -0.4
Tlr3Q99MB1 Gm8566-201ENSMUST00000120174 465 ntBASIC12.55□□□□□ -0.4
Tlr3Q99MB1 Gm12196-201ENSMUST00000120954 262 ntBASIC12.55□□□□□ -0.4
Tlr3Q99MB1 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms