Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Gm21769-201ENSMUST00000211922 111 ntBASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Gm9368-201ENSMUST00000219348 831 ntBASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Cdk5rap3Q99LM2 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap3Q99LM2 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap3Q99LM2 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap3Q99LM2 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.09□□□□□ -0.47
Cdk5rap3Q99LM2 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap3Q99LM2 Gm5124-202ENSMUST00000132683 2083 ntBASIC12.09□□□□□ -0.47
Cdk5rap3Q99LM2 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cdk5rap3Q99LM2 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap3Q99LM2 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap3Q99LM2 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap3Q99LM2 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap3Q99LM2 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap3Q99LM2 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cdk5rap3Q99LM2 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap3Q99LM2 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap3Q99LM2 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.09□□□□□ -0.47
Cdk5rap3Q99LM2 Gm43962-201ENSMUST00000203898 190 ntBASIC12.09□□□□□ -0.47
Cdk5rap3Q99LM2 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.09□□□□□ -0.47
Cdk5rap3Q99LM2 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.09□□□□□ -0.47
Cdk5rap3Q99LM2 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap3Q99LM2 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap3Q99LM2 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap3Q99LM2 Gm10478-201ENSMUST00000084451 396 ntBASIC12.09□□□□□ -0.47
Cdk5rap3Q99LM2 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap3Q99LM2 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap3Q99LM2 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap3Q99LM2 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap3Q99LM2 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap3Q99LM2 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap3Q99LM2 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap3Q99LM2 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap3Q99LM2 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap3Q99LM2 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap3Q99LM2 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cdk5rap3Q99LM2 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.09□□□□□ -0.47
Cdk5rap3Q99LM2 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.09□□□□□ -0.47
Cdk5rap3Q99LM2 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cdk5rap3Q99LM2 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Cdk5rap3Q99LM2 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cdk5rap3Q99LM2 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Cdk5rap3Q99LM2 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Gm26286-201ENSMUST00000104166 134 ntBASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Gm13392-201ENSMUST00000117708 150 ntBASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Gm11660-201ENSMUST00000120955 412 ntBASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Gm32999-201ENSMUST00000192693 562 ntBASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 Rprl1-202ENSMUST00000198476 238 ntBASIC12.08□□□□□ -0.48
Cdk5rap3Q99LM2 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms