Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Gm43438-201ENSMUST00000198133 379 ntBASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Gm43758-201ENSMUST00000199500 367 ntBASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Gm43002-201ENSMUST00000200310 155 ntBASIC11.31□□□□□ -0.6
Cstf3Q99LI7 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Gm8420-201ENSMUST00000097103 598 ntBASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Cstf3Q99LI7 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cstf3Q99LI7 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cstf3Q99LI7 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Gm22133-201ENSMUST00000102082 109 ntBASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Cstf3Q99LI7 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cstf3Q99LI7 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Gm43822-201ENSMUST00000200285 476 ntBASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Gm45331-201ENSMUST00000209868 554 ntBASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cstf3Q99LI7 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Cstf3Q99LI7 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Cstf3Q99LI7 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms