Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rab28Q99KL7 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rab28Q99KL7 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab28Q99KL7 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab28Q99KL7 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab28Q99KL7 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab28Q99KL7 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab28Q99KL7 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rab28Q99KL7 Gm22920-201ENSMUST00000102175 109 ntBASIC11.28□□□□□ -0.6
Rab28Q99KL7 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab28Q99KL7 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.28□□□□□ -0.6
Rab28Q99KL7 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.28□□□□□ -0.6
Rab28Q99KL7 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.28□□□□□ -0.6
Rab28Q99KL7 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.28□□□□□ -0.6
Rab28Q99KL7 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab28Q99KL7 Gm10051-201ENSMUST00000145209 414 ntBASIC11.28□□□□□ -0.6
Rab28Q99KL7 Gm7666-201ENSMUST00000146631 819 ntBASIC11.28□□□□□ -0.6
Rab28Q99KL7 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.28□□□□□ -0.6
Rab28Q99KL7 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rab28Q99KL7 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab28Q99KL7 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.28□□□□□ -0.6
Rab28Q99KL7 Gm44506-201ENSMUST00000206278 965 ntBASIC11.28□□□□□ -0.6
Rab28Q99KL7 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.28□□□□□ -0.6
Rab28Q99KL7 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.28□□□□□ -0.6
Rab28Q99KL7 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab28Q99KL7 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rab28Q99KL7 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Rab28Q99KL7 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab28Q99KL7 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.28□□□□□ -0.6
Rab28Q99KL7 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab28Q99KL7 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.28□□□□□ -0.6
Rab28Q99KL7 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rab28Q99KL7 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab28Q99KL7 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab28Q99KL7 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab28Q99KL7 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab28Q99KL7 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab28Q99KL7 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab28Q99KL7 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Rab28Q99KL7 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab28Q99KL7 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab28Q99KL7 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rab28Q99KL7 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab28Q99KL7 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Rab28Q99KL7 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rab28Q99KL7 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rab28Q99KL7 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rab28Q99KL7 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rab28Q99KL7 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rab28Q99KL7 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Rab28Q99KL7 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Rab28Q99KL7 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rab28Q99KL7 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.27□□□□□ -0.6
Rab28Q99KL7 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rab28Q99KL7 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rab28Q99KL7 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Rab28Q99KL7 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Rab28Q99KL7 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rab28Q99KL7 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.27□□□□□ -0.6
Rab28Q99KL7 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab28Q99KL7 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab28Q99KL7 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab28Q99KL7 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab28Q99KL7 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab28Q99KL7 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab28Q99KL7 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab28Q99KL7 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Rab28Q99KL7 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Rab28Q99KL7 Gm13408-201ENSMUST00000119822 798 ntBASIC11.27□□□□□ -0.61
Rab28Q99KL7 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.27□□□□□ -0.61
Rab28Q99KL7 Gm13935-201ENSMUST00000121859 798 ntBASIC11.27□□□□□ -0.61
Rab28Q99KL7 Gm24844-201ENSMUST00000158679 127 ntBASIC11.27□□□□□ -0.61
Rab28Q99KL7 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rab28Q99KL7 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Rab28Q99KL7 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.27□□□□□ -0.61
Rab28Q99KL7 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab28Q99KL7 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab28Q99KL7 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.27□□□□□ -0.61
Rab28Q99KL7 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab28Q99KL7 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab28Q99KL7 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab28Q99KL7 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab28Q99KL7 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab28Q99KL7 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab28Q99KL7 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Rab28Q99KL7 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab28Q99KL7 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Rab28Q99KL7 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Rab28Q99KL7 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Rab28Q99KL7 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.27□□□□□ -0.61
Rab28Q99KL7 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab28Q99KL7 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Rab28Q99KL7 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Rab28Q99KL7 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Rab28Q99KL7 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab28Q99KL7 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab28Q99KL7 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rab28Q99KL7 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Rab28Q99KL7 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Rab28Q99KL7 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms