Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC12.33□□□□□ -0.43
Usp11Q99K46 AC124577.2-201ENSMUST00000217413 2420 ntBASIC12.33□□□□□ -0.43
Usp11Q99K46 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.33□□□□□ -0.43
Usp11Q99K46 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Usp11Q99K46 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp11Q99K46 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp11Q99K46 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp11Q99K46 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp11Q99K46 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Usp11Q99K46 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp11Q99K46 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Usp11Q99K46 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Usp11Q99K46 Gm13996-201ENSMUST00000118456 430 ntBASIC12.33□□□□□ -0.44
Usp11Q99K46 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.33□□□□□ -0.44
Usp11Q99K46 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.33□□□□□ -0.44
Usp11Q99K46 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Usp11Q99K46 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.33□□□□□ -0.44
Usp11Q99K46 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Usp11Q99K46 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.33□□□□□ -0.44
Usp11Q99K46 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.33□□□□□ -0.44
Usp11Q99K46 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.33□□□□□ -0.44
Usp11Q99K46 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp11Q99K46 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp11Q99K46 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Usp11Q99K46 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp11Q99K46 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp11Q99K46 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
Usp11Q99K46 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp11Q99K46 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Usp11Q99K46 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Usp11Q99K46 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp11Q99K46 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp11Q99K46 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Usp11Q99K46 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Usp11Q99K46 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp11Q99K46 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp11Q99K46 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp11Q99K46 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp11Q99K46 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp11Q99K46 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp11Q99K46 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp11Q99K46 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Usp11Q99K46 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp11Q99K46 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp11Q99K46 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp11Q99K46 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp11Q99K46 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp11Q99K46 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.32□□□□□ -0.44
Usp11Q99K46 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Usp11Q99K46 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp11Q99K46 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp11Q99K46 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp11Q99K46 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp11Q99K46 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp11Q99K46 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp11Q99K46 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Usp11Q99K46 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp11Q99K46 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp11Q99K46 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp11Q99K46 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp11Q99K46 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp11Q99K46 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp11Q99K46 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp11Q99K46 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp11Q99K46 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp11Q99K46 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Usp11Q99K46 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.32□□□□□ -0.44
Usp11Q99K46 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Usp11Q99K46 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usp11Q99K46 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp11Q99K46 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Usp11Q99K46 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usp11Q99K46 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Usp11Q99K46 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usp11Q99K46 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usp11Q99K46 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usp11Q99K46 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp11Q99K46 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp11Q99K46 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Usp11Q99K46 Gm15236-201ENSMUST00000117309 379 ntBASIC12.31□□□□□ -0.44
Usp11Q99K46 Gm14247-201ENSMUST00000120950 237 ntBASIC12.31□□□□□ -0.44
Usp11Q99K46 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usp11Q99K46 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usp11Q99K46 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usp11Q99K46 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Usp11Q99K46 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Usp11Q99K46 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.31□□□□□ -0.44
Usp11Q99K46 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.31□□□□□ -0.44
Usp11Q99K46 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Usp11Q99K46 Gm44262-201ENSMUST00000204969 372 ntBASIC12.31□□□□□ -0.44
Usp11Q99K46 Gm45186-201ENSMUST00000206874 478 ntBASIC12.31□□□□□ -0.44
Usp11Q99K46 Gm8913-201ENSMUST00000209491 641 ntBASIC12.31□□□□□ -0.44
Usp11Q99K46 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.31□□□□□ -0.44
Usp11Q99K46 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Usp11Q99K46 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.31□□□□□ -0.44
Usp11Q99K46 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12.31□□□□□ -0.44
Usp11Q99K46 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Usp11Q99K46 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Usp11Q99K46 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.31□□□□□ -0.44
Usp11Q99K46 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms