Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Gm42693-201ENSMUST00000196779 631 ntBASIC11.78□□□□□ -0.52
Cdk9Q99J95 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Cdk9Q99J95 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Cdk9Q99J95 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.78□□□□□ -0.52
Cdk9Q99J95 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cdk9Q99J95 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Cdk9Q99J95 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Cdk9Q99J95 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.77□□□□□ -0.52
Cdk9Q99J95 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk9Q99J95 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.77□□□□□ -0.53
Cdk9Q99J95 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk9Q99J95 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Cdk9Q99J95 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Gm6222-202ENSMUST00000182143 629 ntBASIC11.77□□□□□ -0.53
Cdk9Q99J95 Gm43002-201ENSMUST00000200310 155 ntBASIC11.77□□□□□ -0.53
Cdk9Q99J95 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.77□□□□□ -0.53
Cdk9Q99J95 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Cdk9Q99J95 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk9Q99J95 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cdk9Q99J95 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk9Q99J95 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.76□□□□□ -0.53
Cdk9Q99J95 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk9Q99J95 Nrip3-201ENSMUST00000033331 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk9Q99J95 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk9Q99J95 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Cdk9Q99J95 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk9Q99J95 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk9Q99J95 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk9Q99J95 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Cdk9Q99J95 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cdk9Q99J95 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk9Q99J95 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.76□□□□□ -0.53
Cdk9Q99J95 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk9Q99J95 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk9Q99J95 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk9Q99J95 Gm11591-201ENSMUST00000120063 702 ntBASIC11.76□□□□□ -0.53
Cdk9Q99J95 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk9Q99J95 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Cdk9Q99J95 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.76□□□□□ -0.53
Cdk9Q99J95 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Cdk9Q99J95 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Cdk9Q99J95 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.76□□□□□ -0.53
Cdk9Q99J95 Gm42937-201ENSMUST00000197360 752 ntBASIC11.76□□□□□ -0.53
Cdk9Q99J95 Gm18711-201ENSMUST00000199341 750 ntBASIC11.76□□□□□ -0.53
Cdk9Q99J95 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.76□□□□□ -0.53
Cdk9Q99J95 CT010486.3-201ENSMUST00000224555 811 ntBASIC11.76□□□□□ -0.53
Cdk9Q99J95 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms