Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 Gm12857-201ENSMUST00000117678 592 ntBASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 Gm6114-201ENSMUST00000182472 968 ntBASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 Gm2965-201ENSMUST00000198365 343 ntBASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdha3Q91Y16 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 AC131586.1-201ENSMUST00000228844 2964 ntBASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Gm15004-201ENSMUST00000119192 630 ntBASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Gm11450-201ENSMUST00000121144 333 ntBASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Gm4482-201ENSMUST00000200876 742 ntBASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdha3Q91Y16 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdha3Q91Y16 Gm24891-201ENSMUST00000104391 136 ntBASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms