Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb1Q91Y08 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 AC165351.1-201ENSMUST00000219078 2020 ntBASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 Gm14208-201ENSMUST00000119645 678 ntBASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 Gm25881-201ENSMUST00000157783 103 ntBASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 Gm45113-201ENSMUST00000207518 165 ntBASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 Gm7964-201ENSMUST00000051522 1378 ntBASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb1Q91Y08 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Gm8100-201ENSMUST00000182906 988 ntBASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Gm27530-201ENSMUST00000184096 98 ntBASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Gm45575-201ENSMUST00000210283 548 ntBASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Gm10254-201ENSMUST00000052888 867 ntBASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
Pcdhb1Q91Y08 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms