Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
StrcQ8VIM6 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
StrcQ8VIM6 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC13.55□□□□□ -0.24
StrcQ8VIM6 Gm11540-201ENSMUST00000117457 780 ntBASIC13.55□□□□□ -0.24
StrcQ8VIM6 Gm15031-201ENSMUST00000121341 210 ntBASIC13.55□□□□□ -0.24
StrcQ8VIM6 Gm16537-201ENSMUST00000161529 702 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
StrcQ8VIM6 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC13.55□□□□□ -0.24
StrcQ8VIM6 Gm8170-201ENSMUST00000218581 945 ntBASIC13.55□□□□□ -0.24
StrcQ8VIM6 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
StrcQ8VIM6 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
StrcQ8VIM6 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
StrcQ8VIM6 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Btrc-209ENSMUST00000224478 2194 ntBASIC13.55□□□□□ -0.24
StrcQ8VIM6 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Gm5860-201ENSMUST00000137810 1028 ntTSL 2 BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Mir6934-201ENSMUST00000183965 62 ntBASIC13.55□□□□□ -0.24
StrcQ8VIM6 Gm2474-201ENSMUST00000195162 559 ntBASIC13.55□□□□□ -0.24
StrcQ8VIM6 Gm43117-201ENSMUST00000198531 379 ntBASIC13.55□□□□□ -0.24
StrcQ8VIM6 Gm3527-201ENSMUST00000198905 460 ntBASIC13.55□□□□□ -0.24
StrcQ8VIM6 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Gm5650-201ENSMUST00000209641 598 ntBASIC13.55□□□□□ -0.24
StrcQ8VIM6 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
StrcQ8VIM6 Gm5739-201ENSMUST00000208601 1703 ntBASIC13.54□□□□□ -0.24
StrcQ8VIM6 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
StrcQ8VIM6 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
StrcQ8VIM6 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.54□□□□□ -0.24
StrcQ8VIM6 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
StrcQ8VIM6 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
StrcQ8VIM6 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
StrcQ8VIM6 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
StrcQ8VIM6 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
StrcQ8VIM6 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
StrcQ8VIM6 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
StrcQ8VIM6 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC13.54□□□□□ -0.24
StrcQ8VIM6 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
StrcQ8VIM6 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
StrcQ8VIM6 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC13.54□□□□□ -0.24
StrcQ8VIM6 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC13.54□□□□□ -0.24
StrcQ8VIM6 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
StrcQ8VIM6 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
StrcQ8VIM6 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
StrcQ8VIM6 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.54□□□□□ -0.24
StrcQ8VIM6 AC090962.2-201ENSMUST00000225064 1801 ntBASIC13.54□□□□□ -0.24
StrcQ8VIM6 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
StrcQ8VIM6 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
StrcQ8VIM6 Gm10254-201ENSMUST00000052888 867 ntBASIC13.54□□□□□ -0.24
StrcQ8VIM6 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
StrcQ8VIM6 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
StrcQ8VIM6 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.54□□□□□ -0.24
StrcQ8VIM6 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
StrcQ8VIM6 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
StrcQ8VIM6 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC13.53□□□□□ -0.24
StrcQ8VIM6 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
StrcQ8VIM6 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.53□□□□□ -0.24
StrcQ8VIM6 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
StrcQ8VIM6 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
StrcQ8VIM6 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
StrcQ8VIM6 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
StrcQ8VIM6 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
StrcQ8VIM6 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
StrcQ8VIM6 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
StrcQ8VIM6 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC13.53□□□□□ -0.24
StrcQ8VIM6 Prelid3b-203ENSMUST00000120822 622 ntTSL 3 BASIC13.53□□□□□ -0.24
StrcQ8VIM6 Gm14639-201ENSMUST00000120850 866 ntBASIC13.53□□□□□ -0.24
StrcQ8VIM6 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC13.53□□□□□ -0.24
StrcQ8VIM6 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
StrcQ8VIM6 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms