Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim60Q8VI40 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trim60Q8VI40 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.07□□□□□ -0.48
Trim60Q8VI40 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim60Q8VI40 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Trim60Q8VI40 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
Trim60Q8VI40 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim60Q8VI40 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.07□□□□□ -0.48
Trim60Q8VI40 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim60Q8VI40 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim60Q8VI40 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim60Q8VI40 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim60Q8VI40 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trim60Q8VI40 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
Trim60Q8VI40 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.07□□□□□ -0.48
Trim60Q8VI40 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim60Q8VI40 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trim60Q8VI40 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.06□□□□□ -0.48
Trim60Q8VI40 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim60Q8VI40 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.06□□□□□ -0.48
Trim60Q8VI40 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim60Q8VI40 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim60Q8VI40 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trim60Q8VI40 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim60Q8VI40 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trim60Q8VI40 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Trim60Q8VI40 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim60Q8VI40 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim60Q8VI40 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim60Q8VI40 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim60Q8VI40 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.06□□□□□ -0.48
Trim60Q8VI40 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim60Q8VI40 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim60Q8VI40 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim60Q8VI40 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim60Q8VI40 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim60Q8VI40 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trim60Q8VI40 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trim60Q8VI40 Gm43966-201ENSMUST00000203301 612 ntBASIC12.06□□□□□ -0.48
Trim60Q8VI40 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim60Q8VI40 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trim60Q8VI40 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.06□□□□□ -0.48
Trim60Q8VI40 Gm9368-201ENSMUST00000219348 831 ntBASIC12.06□□□□□ -0.48
Trim60Q8VI40 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim60Q8VI40 Gm10254-201ENSMUST00000052888 867 ntBASIC12.06□□□□□ -0.48
Trim60Q8VI40 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim60Q8VI40 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trim60Q8VI40 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trim60Q8VI40 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.06□□□□□ -0.48
Trim60Q8VI40 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim60Q8VI40 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim60Q8VI40 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trim60Q8VI40 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trim60Q8VI40 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim60Q8VI40 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trim60Q8VI40 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim60Q8VI40 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.05□□□□□ -0.48
Trim60Q8VI40 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim60Q8VI40 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim60Q8VI40 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.05□□□□□ -0.48
Trim60Q8VI40 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim60Q8VI40 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim60Q8VI40 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trim60Q8VI40 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.05□□□□□ -0.48
Trim60Q8VI40 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.05□□□□□ -0.48
Trim60Q8VI40 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.05□□□□□ -0.48
Trim60Q8VI40 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trim60Q8VI40 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms