Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Gm11331-201ENSMUST00000119764 288 ntBASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Gm23699-201ENSMUST00000158835 135 ntBASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Mir3102-201ENSMUST00000175555 104 ntBASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Gm28937-201ENSMUST00000185413 695 ntBASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Gm29400-201ENSMUST00000187208 695 ntBASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Gm28662-201ENSMUST00000188446 695 ntBASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Gm28251-201ENSMUST00000188835 695 ntBASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Gm37318-201ENSMUST00000194325 695 ntBASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Gm38017-201ENSMUST00000194768 695 ntBASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Gm37287-201ENSMUST00000195449 695 ntBASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Gm37793-201ENSMUST00000195548 695 ntBASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Gm5714-201ENSMUST00000197343 566 ntBASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Gm35960-201ENSMUST00000202712 767 ntBASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Nsd1-205ENSMUST00000224693 852 ntBASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.07□□□□□ -0.48
Rprd1aQ8VDS4 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Gm12165-201ENSMUST00000117047 342 ntBASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Gm13809-201ENSMUST00000117921 597 ntBASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Gm13263-201ENSMUST00000121271 838 ntBASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Gm9555-201ENSMUST00000200908 583 ntBASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Rprd1aQ8VDS4 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms