Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 AC124577.2-201ENSMUST00000217413 2420 ntBASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Nup35Q8R4R6 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Gm43937-201ENSMUST00000204640 3122 ntBASIC9.5□□□□□ -0.89
Nup35Q8R4R6 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Gm19178-201ENSMUST00000217524 1819 ntBASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Mir1247-201ENSMUST00000116706 82 ntBASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Gm9794-201ENSMUST00000202370 423 ntBASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Gm19287-201ENSMUST00000203190 358 ntBASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Gm12846-201ENSMUST00000120431 1373 ntBASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Nup35Q8R4R6 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC9.49□□□□□ -0.89
Nup35Q8R4R6 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Nup35Q8R4R6 CU024892.2-201ENSMUST00000224608 832 ntBASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms