Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Gm28251-201ENSMUST00000188835 695 ntBASIC13.36□□□□□ -0.27
Trim29Q8R2Q0 Gm37666-201ENSMUST00000194110 866 ntBASIC13.36□□□□□ -0.27
Trim29Q8R2Q0 Gm37318-201ENSMUST00000194325 695 ntBASIC13.36□□□□□ -0.27
Trim29Q8R2Q0 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim29Q8R2Q0 Gm38117-201ENSMUST00000194653 939 ntBASIC13.36□□□□□ -0.27
Trim29Q8R2Q0 Gm38017-201ENSMUST00000194768 695 ntBASIC13.36□□□□□ -0.27
Trim29Q8R2Q0 Gm37287-201ENSMUST00000195449 695 ntBASIC13.36□□□□□ -0.27
Trim29Q8R2Q0 Gm37793-201ENSMUST00000195548 695 ntBASIC13.36□□□□□ -0.27
Trim29Q8R2Q0 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC13.36□□□□□ -0.27
Trim29Q8R2Q0 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim29Q8R2Q0 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim29Q8R2Q0 Gm18730-201ENSMUST00000218038 343 ntBASIC13.36□□□□□ -0.27
Trim29Q8R2Q0 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.36□□□□□ -0.27
Trim29Q8R2Q0 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim29Q8R2Q0 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trim29Q8R2Q0 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim29Q8R2Q0 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim29Q8R2Q0 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim29Q8R2Q0 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC13.36□□□□□ -0.27
Trim29Q8R2Q0 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim29Q8R2Q0 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim29Q8R2Q0 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim29Q8R2Q0 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trim29Q8R2Q0 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 Gm28686-201ENSMUST00000187404 609 ntBASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 Gm38228-201ENSMUST00000193169 1293 ntBASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 AC093022.1-201ENSMUST00000226949 1072 ntBASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 AC124397.2-201ENSMUST00000225575 2215 ntBASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim29Q8R2Q0 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Gm11509-201ENSMUST00000117358 325 ntBASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Gm12380-201ENSMUST00000119012 544 ntBASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Gm15207-201ENSMUST00000119259 442 ntBASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Gm29199-201ENSMUST00000187766 775 ntBASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 Gm18212-201ENSMUST00000211678 889 ntBASIC13.34□□□□□ -0.27
Trim29Q8R2Q0 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms