Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC10.62□□□□□ -0.71
Ebf4Q8K4J2 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ebf4Q8K4J2 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
Ebf4Q8K4J2 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Ebf4Q8K4J2 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ebf4Q8K4J2 Gm6114-201ENSMUST00000182472 968 ntBASIC10.62□□□□□ -0.71
Ebf4Q8K4J2 Gm38241-201ENSMUST00000192641 898 ntBASIC10.62□□□□□ -0.71
Ebf4Q8K4J2 Gm5904-201ENSMUST00000210286 865 ntBASIC10.62□□□□□ -0.71
Ebf4Q8K4J2 Gm45668-201ENSMUST00000211271 493 ntBASIC10.62□□□□□ -0.71
Ebf4Q8K4J2 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ebf4Q8K4J2 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ebf4Q8K4J2 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ebf4Q8K4J2 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ebf4Q8K4J2 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ebf4Q8K4J2 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ebf4Q8K4J2 Gm10012-201ENSMUST00000078252 192 ntBASIC10.62□□□□□ -0.71
Ebf4Q8K4J2 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ebf4Q8K4J2 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ebf4Q8K4J2 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ebf4Q8K4J2 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ebf4Q8K4J2 Ift88-201ENSMUST00000122063 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ebf4Q8K4J2 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ebf4Q8K4J2 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Ebf4Q8K4J2 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ebf4Q8K4J2 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ebf4Q8K4J2 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ebf4Q8K4J2 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ebf4Q8K4J2 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ebf4Q8K4J2 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Ebf4Q8K4J2 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ebf4Q8K4J2 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Ebf4Q8K4J2 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ebf4Q8K4J2 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ebf4Q8K4J2 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ebf4Q8K4J2 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ebf4Q8K4J2 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC10.62□□□□□ -0.71
Ebf4Q8K4J2 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Gm4271-201ENSMUST00000174444 973 ntBASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Gm27701-201ENSMUST00000184498 110 ntBASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Gm28911-201ENSMUST00000188837 117 ntBASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Gm19994-201ENSMUST00000217086 586 ntBASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Gm6124-201ENSMUST00000188240 2580 ntBASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Tmprss2-201ENSMUST00000000395 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Ebf4Q8K4J2 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 CT010480.4-201ENSMUST00000224654 2283 ntBASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Armcx6-201ENSMUST00000052431 2024 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Ebf4Q8K4J2 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms