Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 Gm13347-201ENSMUST00000120298 1353 ntBASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Cchcr1Q8K2I2 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Gm26047-201ENSMUST00000157308 113 ntBASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Gm27627-201ENSMUST00000183644 150 ntBASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Gm38117-201ENSMUST00000194653 939 ntBASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Gm26047-202ENSMUST00000198840 115 ntBASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Gm43822-201ENSMUST00000200285 476 ntBASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Gm43966-201ENSMUST00000203301 612 ntBASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Gm10254-201ENSMUST00000052888 867 ntBASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 AC127597.1-201ENSMUST00000225697 5711 ntBASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Gm14150-201ENSMUST00000122404 1354 ntBASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Cchcr1Q8K2I2 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Cchcr1Q8K2I2 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cchcr1Q8K2I2 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cchcr1Q8K2I2 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cchcr1Q8K2I2 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cchcr1Q8K2I2 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
Cchcr1Q8K2I2 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC13.79□□□□□ -0.2
Cchcr1Q8K2I2 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cchcr1Q8K2I2 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cchcr1Q8K2I2 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cchcr1Q8K2I2 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cchcr1Q8K2I2 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cchcr1Q8K2I2 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Cchcr1Q8K2I2 Gm11500-201ENSMUST00000118237 601 ntBASIC13.79□□□□□ -0.2
Cchcr1Q8K2I2 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Cchcr1Q8K2I2 Gm26361-201ENSMUST00000158868 186 ntBASIC13.79□□□□□ -0.2
Cchcr1Q8K2I2 Gm25700-201ENSMUST00000177693 110 ntBASIC13.79□□□□□ -0.2
Cchcr1Q8K2I2 Gm5982-201ENSMUST00000196234 512 ntBASIC13.79□□□□□ -0.2
Cchcr1Q8K2I2 Gm43630-201ENSMUST00000201550 776 ntBASIC13.79□□□□□ -0.2
Cchcr1Q8K2I2 Gm17812-201ENSMUST00000204935 318 ntBASIC13.79□□□□□ -0.2
Cchcr1Q8K2I2 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.79□□□□□ -0.2
Cchcr1Q8K2I2 Gm45224-201ENSMUST00000208203 414 ntBASIC13.79□□□□□ -0.2
Cchcr1Q8K2I2 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cchcr1Q8K2I2 AC134869.4-202ENSMUST00000224350 837 ntBASIC13.79□□□□□ -0.2
Cchcr1Q8K2I2 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cchcr1Q8K2I2 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cchcr1Q8K2I2 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cchcr1Q8K2I2 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC13.79□□□□□ -0.2
Cchcr1Q8K2I2 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cchcr1Q8K2I2 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Cchcr1Q8K2I2 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Cchcr1Q8K2I2 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cchcr1Q8K2I2 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Cchcr1Q8K2I2 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Cchcr1Q8K2I2 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Cchcr1Q8K2I2 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC13.79□□□□□ -0.2
Cchcr1Q8K2I2 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 AC165351.1-201ENSMUST00000219078 2020 ntBASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Cchcr1Q8K2I2 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms